Assay Details
Target Gene Details
Entrez Gene ID: | 126208 |
Gene Name: | zinc finger protein 787 |
Gene Aliases: |
TIP20 |
Location: |
Chr.19:56087363-56121373 on Build GRCh38 |
Assay Gene Location: | Within Exon 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
ZNF787 | NM_001002836.3 | NP_001002836.2 | ||
XM_011526445.2 | 1 | 1423 | XP_011524747.1 | |
BC077728.1 | AAH77728.1 | |||
HY059733.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv833883 | Chr.19:56001235 - 56128720 on Build GRCh38 | Loss | NLRP5 ZNF787 LOC101928886 |
esv3348405 | Chr.19:56106815 - 56106815 on Build GRCh38 | Insertion | ZNF787 |
esv1002478 | Chr.19:56106733 - 56106733 on Build GRCh38 | Insertion | ZNF787 |
dgv207n21 | Chr.19:56080920 - 56175584 on Build GRCh38 | Loss | ZNF444 ZNF787 |
esv1007685 | Chr.19:56106813 - 56106813 on Build GRCh38 | Insertion | ZNF787 |
esv3431520 | Chr.19:56106735 - 56106735 on Build GRCh38 | Insertion | ZNF787 |
dgv3681n100 | Chr.19:55906849 - 56338089 on Build GRCh38 | Gain | ZSCAN5A NLRP5 GALP ZNF444 ZSCAN5B NLRP13 ZNF787 NLRP8 LOC101928886 |
esv1027952 | Chr.19:56106814 - 56106814 on Build GRCh38 | Insertion | ZNF787 |
dgv206n21 | Chr.19:56026162 - 56195679 on Build GRCh38 | Loss | NLRP5 GALP ZNF444 ZSCAN5B ZNF787 LOC101928886 |
nsv580354 | Chr.19:55994319 - 56212123 on Build GRCh38 | Gain | NLRP5 GALP ZNF444 ZSCAN5B ZNF787 LOC101928886 |
nsv952151 | Chr.19:56106132 - 56108731 on Build GRCh38 | Deletion | ZNF787 |
nsv1057820 | Chr.19:56044576 - 56208893 on Build GRCh38 | Gain | NLRP5 GALP ZNF444 ZSCAN5B ZNF787 LOC101928886 |
More Information
Additional Information:
For this assay, SNP(s) [rs112494797] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |