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System Message

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See other TFPT CNV Assays ›
Gene Symbol
TFPT
Assay Reference Genome
Location

Chr.19:54114186 on build GRCh38
Cytoband
19q13.42
Assay ID Hs07145224_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Online offer:
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Assay Details

Target Gene Details

Entrez Gene ID:

 29844

Gene Name:

 TCF3 fusion partner

Gene Aliases:

 FB1, INO80F, amida

Location:

 Chr.19:54107013-54115675 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TFPT NM_001321792.1 NP_001308721.1
NM_013342.3 NP_037474.1
XM_005278261.1 XP_005278318.1
AF052052.1 AAD45182.1
AK310627.1
AK310647.1
BC004281.1 AAH04281.1
BC007776.2 AAH07776.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv510773 Chr.19:54017180 - 54132236 on Build GRCh38 Deletion TARM1 TFPT NDUFA3 PRPF31 OSCAR VSTM1
nsv515623 Chr.19:54102901 - 54179150 on Build GRCh38 Loss MBOAT7 LENG1 TFPT NDUFA3 PRPF31 CNOT3 TMC4
nsv953613 Chr.19:54097214 - 54198733 on Build GRCh38 Deletion MBOAT7 LENG1 TFPT NDUFA3 PRPF31 CNOT3 OSCAR TMC4 TSEN34
esv2718812 Chr.19:53184636 - 54322450 on Build GRCh38 Deletion LILRA5 MIR516A2 MIR520A MIR519E MIR371A CACNG6 ZNF525 ZNF818P MIR517A MIR498 ZNF813 LOC105372457 MIR518D ZNF765 LOC284379 TARM1 MIR1323 MIR520B NDUFA3 MIR521-1 ZNF761 ZNF677 PRKCG LILRB2 TPM3P9 CACNG7 ZNF665 FAM90A27P MIR519A2 CACNG8 MIR518F TMC4 ZNF331 TSEN34 MIR517C MIR520E MIR518B MBOAT7 MIR523 MIR518A2 BIRC8 MIR512-1 MIR519D MIR522 ZNF845 MIR1283-2 MIR520C MIR373 MIR520G MIR4752 LILRA6 PRPF31 MIR518A1 MIR517B OSCAR MIR1283-1 MIR519A1 MIR935 LILRB5 TFPT RPS9 MIR371B MIR520F LILRB3 MIR516A1 MIR512-2 MIR526A1 MIR519B MIR516B2 MIR519C MIR518C MIR526A2 VN1R4 VSTM1 MIR516B1 NLRP12 MIR518E MIR520D MIR525 MIR520H MIR372 MIR515-1 MIR524 MIR527 LENG1 VN1R2 MIR515-2 MIR521-2 CNOT3 DPRX MIR526B MYADM
nsv470157 Chr.19:54063999 - 54127773 on Build GRCh38 Loss TARM1 TFPT NDUFA3 PRPF31 OSCAR
nsv833877 Chr.19:53951529 - 54117323 on Build GRCh38 Loss MIR935 TARM1 TFPT NDUFA3 PRPF31 CACNG6 CACNG8 OSCAR VSTM1

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