Hs07130445_cn

• Gene Symbol: NFIX
• Assay Reference Genome Location: Chr.19:13004428 on build GRCh38
• Cytoband: 19p13.13

Target Gene Details

• Entrez Gene ID: 4784
• Gene Name: nuclear factor I X
• Gene Aliases: MRSHSS, NF1A, SOTOS2
• Location: Chr.19:12995512-13098796 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
NFIX	NM_002501.3			NP_002492.2
	XM_005259918.4			XP_005259975.1
	XM_017026837.1			XP_016882326.1
	BF115883.1
	BT019732.1			AAV38537.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1055900	Chr.19:12979147 - 13034197 on Build GRCh38	Gain	NFIX
nsv953977	Chr.19:12666887 - 13095486 on Build GRCh38	Deletion	LOC105372280 TNPO2 C19orf43 CALR GADD45GIP1 GCDH DHPS JUNB FBXW9 SNORD135 WDR83 KLF1 MIR6515 HOOK2 DAND5 NFIX DNASE2 ASNA1 BEST2 SNORD41 PRDX2 SYCE2 RNASEH2A MIR5684 RTBDN MIR5695 MIR6794 RAD23A MAST1 FARSA WDR83OS
nsv2422	Chr.19:13000362 - 13032711 on Build GRCh38	Insertion	NFIX
nsv833754	Chr.19:12876208 - 13028186 on Build GRCh38	Loss	MIR6515 SYCE2 GADD45GIP1 GCDH DAND5 NFIX MIR5695 DNASE2 CALR RAD23A FARSA KLF1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

DNA-binding transcription factor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
DNA replication
transcription from RNA polymerase II promoter
positive regulation of transcription from RNA polymerase II promoter

Function(s)

DNA binding
transcription factor activity, sequence-specific DNA binding
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
protein binding