Assay Details
Target Gene Details
Entrez Gene ID: | 4849 |
Gene Name: | CCR4-NOT transcription complex subunit 3 |
Gene Aliases: |
LENG2, NOT3, NOT3H |
Location: |
Chr.19:54137689-54155708 on Build GRCh38 |
Assay Gene Location: | Within Intron 13 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CNOT3 | NM_014516.3 | NP_055331.1 | ||
XM_005278279.1 | XP_005278336.1 | |||
XM_005278280.2 | XP_005278337.1 | |||
XM_005278281.1 | XP_005278338.1 | |||
XM_005278282.2 | XP_005278339.1 | |||
XM_011526992.1 | XP_011525294.1 | |||
XM_011526993.2 | XP_011525295.1 | |||
AB014591.1 | ||||
AF180474.1 | AAF29828.1 | |||
AK160386.1 | BAD18729.1 | |||
AK300434.1 | ||||
AL133647.1 | CAB63766.1 | |||
BC016474.1 | AAH16474.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3644782 | Chr.19:54138064 - 54154026 on Build GRCh38 | Gain | CNOT3 |
nsv515623 | Chr.19:54102901 - 54179150 on Build GRCh38 | Loss | MBOAT7 LENG1 NDUFA3 TFPT PRPF31 TMC4 CNOT3 |
nsv953613 | Chr.19:54097214 - 54198733 on Build GRCh38 | Deletion | MBOAT7 LENG1 OSCAR NDUFA3 TSEN34 TFPT PRPF31 TMC4 CNOT3 |
esv2718812 | Chr.19:53184636 - 54322450 on Build GRCh38 | Deletion | OSCAR MIR1283-2 TSEN34 MIR520H MIR518C MIR519A2 MIR520B MIR519E MIR523 DPRX LILRB5 MIR518D MIR498 TARM1 LENG1 MIR517B MIR512-1 VN1R2 ZNF331 TFPT BIRC8 MIR520F ZNF818P MIR520D MIR512-2 ZNF765 MIR516A2 RPS9 MIR518E MIR517C MIR526A1 MIR519A1 MIR524 MBOAT7 MIR371B MIR518A2 MIR516B1 MIR517A ZNF761 LILRA5 MIR372 MIR515-2 MIR518F MYADM CNOT3 MIR4752 MIR525 LILRB3 MIR1283-1 MIR519C MIR515-1 ZNF813 ZNF525 MIR373 VN1R4 VSTM1 MIR521-1 MIR526B CACNG7 MIR520G MIR371A CACNG8 PRKCG MIR518B MIR522 MIR520E MIR516A1 MIR526A2 MIR521-2 MIR520C MIR520A LOC284379 LILRA6 CACNG6 MIR527 LILRB2 MIR519B MIR518A1 FAM90A27P MIR519D PRPF31 LOC105372457 MIR935 TMC4 ZNF665 ZNF677 NDUFA3 ZNF845 MIR516B2 TPM3P9 MIR1323 NLRP12 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |