Assay Details
Target Gene Details
Entrez Gene ID: | 8328 |
Gene Name: | growth factor independent 1B transcriptional repressor |
Gene Aliases: |
BDPLT17, ZNF163B |
Location: |
Chr.9:132945545-132991697 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GFI1B | NM_004188.6 | NP_004179.3 | ||
BC043371.1 | AAH43371.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv509329 | Chr.9:132941822 - 132956074 on Build GRCh38 | Insertion | MIR548AW TSC1 GFI1B |
nsv831743 | Chr.9:132820292 - 132982548 on Build GRCh38 | Loss | MIR548AW SPACA9 TSC1 AK8 GFI1B |
esv2739138 | Chr.9:132727483 - 135521553 on Build GRCh38 | Deletion | LOC105376306 CACFD1 BRD3 MIR3689D1 RNU6ATAC ABO GBGT1 LOC101928525 ADAMTS13 MIR4669 RALGDS MIR548AW FCN2 PPP1R26-AS1 LOC100130548 REXO4 MIR3689C GFI1B LINC00094 LOC101928193 COL5A1-AS1 SURF6 LOC101448202 RXRA SNORD36C LCN1 OBP2B PPP1R26 SURF4 TMEM8C FAM163B SNORD36A LOC401557 MIR6877 AK8 SURF2 SLC2A6 SARDH CEL DBH-AS1 OLFM1 VAV2 LOC100996574 STKLD1 SNORD36B MIR3689E RPL7A MIR3689D2 MED22 SNORD24 C9orf116 TSC1 WDR5 MIR3689B SNORD141A ADAMTSL2 MIR3689A MIR3689F MRPS2 GTF3C5 DBH SPACA9 C9orf62 CELP SURF1 FCN1 COL5A1 |
nsv6745 | Chr.9:132929207 - 132958453 on Build GRCh38 | Insertion | MIR548AW TSC1 GFI1B |
More Information
Additional Information:
For this assay, SNP(s) [rs151148327] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |