Assay Details
Target Gene Details
Entrez Gene ID: | 9328 |
Gene Name: | general transcription factor IIIC subunit 5 |
Gene Aliases: |
TFIIIC63, TFIIICepsilon, TFiiiC2-63 |
Location: |
Chr.9:133030675-133058503 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GTF3C5 | NM_001122823.1 | NP_001116295.1 | ||
NM_001286709.1 | NP_001273638.1 | |||
NM_012087.3 | NP_036219.2 | |||
XM_005272234.3 | XP_005272291.1 | |||
XM_011519201.1 | XP_011517503.1 | |||
XM_017015315.1 | XP_016870804.1 | |||
XM_017015316.1 | XP_016870805.1 | |||
AF133124.1 | AAD41476.1 | |||
AJ420443.1 | ||||
AK000194.1 | BAA91001.1 | |||
AK055092.1 | ||||
AK097295.1 | BAC04993.1 | |||
AK225761.1 | ||||
AK293980.1 | ||||
AK311481.1 | ||||
AY007123.1 | AAG01991.1 | |||
BC009741.2 | AAH09741.2 | |||
BC011355.1 | AAH11355.1 | |||
BC017337.2 | AAH17337.1 | |||
BC030157.2 | AAH30157.2 | |||
BQ673969.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2739138 | Chr.9:132727483 - 135521553 on Build GRCh38 | Deletion | ABO STKLD1 MIR3689E MIR4669 SURF1 LOC100996574 MIR3689A COL5A1 RPL7A BRD3 SNORD36A TSC1 SNORD141A ADAMTS13 LOC101928193 MIR3689C C9orf116 LOC401557 SURF6 OBP2B SNORD36B LOC101448202 CACFD1 LOC100130548 MIR3689F COL5A1-AS1 REXO4 AK8 MIR3689D1 SURF4 LCN1 PPP1R26-AS1 RXRA RNU6ATAC MIR3689B MRPS2 WDR5 DBH MED22 CEL LOC101928525 FCN1 PPP1R26 RALGDS TMEM8C GFI1B MIR6877 SPACA9 OLFM1 LOC105376306 ADAMTSL2 DBH-AS1 MIR548AW GBGT1 MIR3689D2 VAV2 SARDH SLC2A6 C9orf62 CELP SNORD36C SURF2 GTF3C5 FCN2 SNORD24 FAM163B LINC00094 |
nsv615596 | Chr.9:133030314 - 133080285 on Build GRCh38 | Loss | LOC100996574 MIR6877 LOC105376306 GTF3C5 CEL |
nsv831744 | Chr.9:132980050 - 133174043 on Build GRCh38 | Gain+Loss | CELP GBGT1 RALGDS GFI1B LOC100996574 MIR6877 LOC105376306 GTF3C5 SNORD141A CEL |
nsv508564 | Chr.9:133013830 - 133073076 on Build GRCh38 | Deletion | LOC100996574 MIR6877 LOC105376306 GTF3C5 SNORD141A CEL |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |