Genomic Map
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Target Gene Details
Entrez Gene ID: | 25978 |
Gene Name: | charged multivesicular body protein 2B |
Gene Aliases: |
ALS17, CHMP2.5, DMT1, VPS2-2, VPS2B |
Location: |
Chr.3:87227263-87255548 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| CHMP2B | NM_001244644.1 | NP_001231573.1 | ||
| NM_014043.3 | NP_054762.2 | |||
| AF151842.1 | AAD34079.1 | |||
| AK002165.1 | ||||
| AK002180.1 | ||||
| AK222654.1 | BAD96374.1 | |||
| AK296072.1 | ||||
| AK316585.1 | ||||
| AL080122.1 | CAB45721.1 | |||
| BC001553.1 | AAH01553.1 | |||
| BI821848.1 | ||||
| BM828410.1 | ||||
| CR533456.1 | CAG38487.1 | |||
| DA426159.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv953231 | Chr.3:87227951 - 87252550 on Build GRCh38 | Duplication |
 CHMP2B
|
| esv3568885 | Chr.3:87182571 - 87518398 on Build GRCh38 | Loss |
CHMP2B
MIR4795
POU1F1
|
| nsv527279 | Chr.3:86796784 - 87814130 on Build GRCh38 | Gain |
CHMP2B
MIR4795
VGLL3
HTR1F
LINC00506
POU1F1
|
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Additional Information:
For this assay, SNP(s) [rs112624215] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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