Hs06581144_cn

• Gene Symbol: PRPF3
• Assay Reference Genome Location: Chr.1:150327608 on build GRCh38
• Cytoband: 1q21.2

Target Gene Details

• Entrez Gene ID: 9129
• Gene Name: pre-mRNA processing factor 3
• Gene Aliases: HPRP3, HPRP3P, PRP3, Prp3p, RP18, SNRNP90
• Location: Chr.1:150321479-150353233 on Build GRCh38
• Assay Gene Location: Overlaps Exon 4 - Intron 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PRPF3	NM_004698.2			NP_004689.1
	XM_011510129.1			XP_011508431.1
	XM_011510131.2			XP_011508433.1
	XM_011510132.2			XP_011508434.1
	XM_017002791.1			XP_016858280.1
	AF001947.1			AAC09069.1
	AF016370.1			AAC51926.1
	AK222825.1			BAD96545.1
	AK297139.1
	AK297265.1
	AK299980.1
	AK309330.1
	AK310241.1
	AK311653.1
	AK312891.1
	BC000184.2			AAH00184.1
	BC001954.1			AAH01954.1
	DC407158.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv479267	Chr.1:150327633 - 150327633 on Build GRCh38	Novel Sequence Insertion	PRPF3
nsv831548	Chr.1:150296285 - 150463240 on Build GRCh38	Loss	MRPS21 PRPF3 RPRD2

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

RNA metabolism protein, RNA processing factor, RNA splicing factor, nucleic acid metabolism protein

Gene Ontology Categories:

Process(es)

spliceosomal tri-snRNP complex assembly
RNA splicing, via transesterification reactions
mRNA splicing, via spliceosome
mRNA processing
RNA splicing

Function(s)

protein binding
identical protein binding
poly(A) RNA binding