Assay Details
Target Gene Details
Entrez Gene ID: | 9646 |
Gene Name: | CTR9 homolog, Paf1/RNA polymerase II complex component |
Gene Aliases: |
SH2BP1, TSBP, p150, p150TSP |
Location: |
Chr.11:10750987-10779755 on Build GRCh38 |
Assay Gene Location: | Within Intron 7 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CTR9 | NM_014633.4 | NP_055448.1 | ||
AK291794.1 | ||||
BC058914.1 | AAH58914.1 | |||
D63875.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv483000 | Chr.11:10678454 - 12678453 on Build GRCh38 | Loss | CTR9 MICALCL SNORD97 LOC101928053 USP47 DKK3 TEAD1 ZBED5 MICAL2 MIR6124 CSNK2A3 PARVA GALNT18 LOC105376545 LOC105376554 MIR4299 MRVI1 EIF4G2 MIR8070 ZBED5-AS1 |
nsv832063 | Chr.11:10596938 - 10763734 on Build GRCh38 | Loss | CTR9 MRVI1-AS1 MRVI1 |
More Information
Additional Information:
For this assay, SNP(s) [rs76650707] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |