Assay Details
Target Gene Details
Entrez Gene ID: | 257202 |
Gene Name: | glutathione peroxidase 6 |
Gene Aliases: |
GPX5p, GPXP3, GPx-6, GSHPx-6, dJ1186N24, dJ1186N24.1 |
Location: |
Chr.6:28503296-28515793 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GPX6 | NM_182701.1 | NP_874360.1 | ||
AY324826.1 | AAP85543.1 | |||
BC133691.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1074388 | Chr.6:28510222 - 29115423 on Build GRCh38 | Deletion | OR2J3 HCG14 LINC01556 ZBED9 TRIM27 LINC00533 HCG16 GPX6 ZNF311 LOC100129636 OR2B3 OR2W1 LINC01623 GPX5 |
dgv3296n106 | Chr.6:28510223 - 28623423 on Build GRCh38 | Deletion | GPX6 ZBED9 GPX5 |
esv3576110 | Chr.6:28449711 - 28681348 on Build GRCh38 | Gain | GPX6 ZBED9 LINC00533 GPX5 |
nsv830621 | Chr.6:28506174 - 28707932 on Build GRCh38 | Gain | GPX6 ZBED9 LINC00533 GPX5 |
nsv601210 | Chr.6:28449445 - 28606638 on Build GRCh38 | Gain | GPX6 ZBED9 GPX5 |
More Information
Additional Information:
For this assay, SNP(s) [rs73740967] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |