Assay Details
Target Gene Details
Entrez Gene ID: | 348932 |
Gene Name: | solute carrier family 6 member 18 |
Gene Aliases: |
Xtrp2 |
Location: |
Chr.5:1225355-1246189 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLC6A18 | NM_182632.2 | NP_872438.2 | ||
AK055798.1 | BAB71018.1 | |||
AK298257.1 | ||||
BC056757.1 | AAH56757.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1033961 | Chr.5:1128595 - 1248239 on Build GRCh38 | Gain | SLC6A19 SLC6A18 CTD-3080P12.3 SLC12A7 |
dgv916e201 | Chr.5:1229736 - 1230226 on Build GRCh38 | Deletion | SLC6A18 |
esv3575810 | Chr.5:1055511 - 1282578 on Build GRCh38 | Gain | SLC6A19 TERT MIR4635 SLC6A18 CTD-3080P12.3 SLC12A7 |
dgv1066e214 | Chr.5:1227977 - 1245183 on Build GRCh38 | Loss | SLC6A18 |
nsv509044 | Chr.5:1147636 - 1265572 on Build GRCh38 | Insertion | SLC6A19 TERT SLC6A18 CTD-3080P12.3 SLC12A7 |
nsv950627 | Chr.5:1008886 - 1300685 on Build GRCh38 | Deletion | SLC6A19 TERT MIR4635 SLC6A18 CTD-3080P12.3 SLC12A7 NKD2 |
nsv596629 | Chr.5:457146 - 1468172 on Build GRCh38 | Gain | MIR4456 MIR4635 LPCAT1 SLC12A7 LINC01511 CLPTM1L SLC6A3 LOC100506688 NKD2 LOC100288152 MIR4457 SLC6A19 TRIP13 BRD9 LOC101929895 SLC6A18 CTD-3080P12.3 TPPP LOC100996325 EXOC3 PP7080 TERT ZDHHC11B ZDHHC11 SLC9A3 CEP72 |
esv3603797 | Chr.5:1086744 - 1259707 on Build GRCh38 | Gain | SLC6A19 TERT SLC6A18 CTD-3080P12.3 SLC12A7 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |