Assay Details
Target Gene Details
Entrez Gene ID: | 6512 |
Gene Name: | solute carrier family 1 member 7 |
Gene Aliases: |
AAAT, EAAT5 |
Location: |
Chr.1:53087179-53142632 on Build GRCh38 |
Assay Gene Location: | Within Intron 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLC1A7 | NM_001287595.1 | NP_001274524.1 | ||
NM_001287596.1 | NP_001274525.1 | |||
NM_001287597.1 | NP_001274526.1 | |||
NM_006671.5 | NP_006662.3 | |||
NR_109858.1 | ||||
AB593059.1 | ||||
AB593060.1 | ||||
AB593061.1 | ||||
BC000651.2 | AAH00651.1 | |||
BC012119.1 | AAH12119.1 | |||
BC017242.2 | AAH17242.1 | |||
JF917096.1 | ||||
U76362.1 | AAB53971.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1003159 | Chr.1:53079580 - 53117512 on Build GRCh38 | Gain | PODN SLC1A7 |
nsv1010121 | Chr.1:52939995 - 53134678 on Build GRCh38 | Gain | MIR1273G SCP2 PODN SLC1A7 |
nsv546240 | Chr.1:53084515 - 53134406 on Build GRCh38 | Loss | PODN SLC1A7 |
nsv950739 | Chr.1:53061429 - 53136228 on Build GRCh38 | Deletion | PODN SLC1A7 |
nsv1001535 | Chr.1:52620368 - 53346539 on Build GRCh38 | Gain | MIR1273G SCP2 MIR1273F ECHDC2 LOC105378732 FAM159A LOC100507564 CPT2 ZYG11A PODN LRP8 MAGOH C1orf123 SLC1A7 MIR5095 ZYG11B COA7 |
More Information
Additional Information:
For this assay, SNP(s) [rs80121951] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |