Assay Details
Target Gene Details
Entrez Gene ID: | 6342 |
Gene Name: | sterol carrier protein 2 |
Gene Aliases: |
NLTP, NSL-TP, SCP-2, SCP-CHI, SCP-X, SCPX |
Location: |
Chr.1:52927229-53051617 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SCP2 | NM_001007098.2 | NP_001007099.1 | ||
NM_001193599.1 | NP_001180528.1 | |||
NM_001193600.1 | NP_001180529.1 | |||
NM_001193617.1 | NP_001180546.1 | |||
NM_002979.4 | NP_002970.2 | |||
XM_005271103.4 | XP_005271160.1 | |||
XM_011541935.2 | XP_011540237.1 | |||
XM_017002045.1 | XP_016857534.1 | |||
AB208789.1 | BAD92026.1 | |||
AK294631.1 | ||||
AK295214.1 | ||||
AK308105.1 | ||||
AK312856.1 | ||||
BC067108.1 | AAH67108.1 | |||
DC330171.1 | ||||
M75883.1 | AAA03557.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1010121 | Chr.1:52939995 - 53134678 on Build GRCh38 | Gain | SCP2 MIR1273G PODN SLC1A7 |
nsv1001535 | Chr.1:52620368 - 53346539 on Build GRCh38 | Gain | ZYG11B ECHDC2 SCP2 COA7 LOC105378732 LOC100507564 LRP8 MAGOH ZYG11A FAM159A C1orf123 MIR1273F CPT2 MIR1273G MIR5095 PODN SLC1A7 |
More Information
Additional Information:
For this assay, SNP(s) [rs74728094,rs76971537] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |