Hs05709651_cn

• Gene Symbol: CSMD2
• Assay Reference Genome Location: Chr.1:33528024 on build GRCh38
• Cytoband: 1p35.1

Target Gene Details

• Entrez Gene ID: 114784
• Gene Name: CUB and Sushi multiple domains 2
• Gene Aliases: dJ1007G16.1, dJ1007G16.2, dJ947L8.1
• Location: Chr.1:33513999-34165842 on Build GRCh38
• Assay Gene Location: Within Intron 67

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CSMD2	NM_001281956.1			NP_001268885.1
	NM_052896.4			NP_443128.2
	XM_017000185.1			XP_016855674.1
	XM_017000186.1			XP_016855675.1
	XM_017000187.1			XP_016855676.1
	XM_017000188.1			XP_016855677.1
	XM_017000189.1			XP_016855678.1
	XM_017000190.1			XP_016855679.1
	XM_017000194.1			XP_016855683.1
	AB067471.1			BAB67777.1
	AB212622.1			BAD97692.1
	AK095627.1			BAC04593.1
	AY210418.1			AAO34701.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3576916	Chr.1:33522001 - 33528964 on Build GRCh38	Gain	CSMD2
esv3585687	Chr.1:33404909 - 33620947 on Build GRCh38	Gain	ZSCAN20 CSMD2 PHC2
esv3585686	Chr.1:33404224 - 33959487 on Build GRCh38	Gain	ZSCAN20 CSMD2-AS1 CSMD2 HMGB4 PHC2

More Information

Additional Information:

For this assay, SNP(s) [rs114208972] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation