Assay Details
Target Gene Details
Entrez Gene ID: | 23399 |
Gene Name: | CTD nuclear envelope phosphatase 1 |
Gene Aliases: |
DULLARD, HSA011916, NET56 |
Location: |
Chr.17:7243587-7251940 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CTDNEP1 | NM_001143775.1 | NP_001137247.1 | ||
NM_015343.4 | NP_056158.2 | |||
AJ011916.1 | CAA09865.1 | |||
AY364239.1 | AAQ76798.1 | |||
BC009295.2 | AAH09295.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2422288 | Chr.17:6789933 - 7646709 on Build GRCh38 | Deletion | TEKT1 SLC35G6 SLC16A11 TMEM95 MIR195 PLSCR3 EIF5A SNORA67 TMEM256 CD68 MIR497HG C17orf74 ELP5 SNORA48 DLG4 LOC100996842 ZBTB4 CLEC10A NEURL4 KCTD11 PHF23 ACADVL SPEM1 TMEM256-PLSCR3 MPDU1 SNORD10 FGF11 FXR2 C17orf49 ATP1B2 CHRNB1 TNK1 POLR2A TMEM102 ACAP1 RNASEK-C17orf49 MIR324 RNASEK TNFSF12-TNFSF13 SLC16A13 LOC107983988 DVL2 ALOX12-AS1 CTDNEP1 ALOX12P2 BCL6B GPS2 FBXO39 EIF4A1 SLC2A4 CLDN7 TNFSF12 YBX2 SHBG TNFSF13 MIR497 ALOX12 SOX15 SENP3-EIF4A1 NLGN2 ASGR1 SAT2 SENP3 GABARAP ASGR2 |
esv3639861 | Chr.17:7198042 - 7261345 on Build GRCh38 | Loss | PHF23 CLDN7 ACADVL MIR324 DVL2 ELP5 CTDNEP1 GABARAP DLG4 |
nsv952118 | Chr.17:7174582 - 7456981 on Build GRCh38 | Deletion | TNK1 TMEM102 ACAP1 MIR324 TMEM95 LOC107983988 PLSCR3 EIF5A TMEM256 DVL2 C17orf74 ELP5 CTDNEP1 DLG4 GPS2 NEURL4 KCTD11 PHF23 SLC2A4 CLDN7 ACADVL SPEM1 TMEM256-PLSCR3 YBX2 FGF11 NLGN2 ASGR1 GABARAP CHRNB1 |
esv2665200 | Chr.17:7091816 - 7333062 on Build GRCh38 | Deletion | NEURL4 PHF23 SLC2A4 CLDN7 ACADVL MIR324 YBX2 EIF5A DVL2 ELP5 ASGR1 CTDNEP1 GABARAP ASGR2 DLG4 GPS2 |
nsv574322 | Chr.17:7010333 - 7689462 on Build GRCh38 | Loss | WRAP53 SLC35G6 SLC16A11 TMEM95 MIR195 PLSCR3 EIF5A SNORA67 TMEM256 CD68 MIR497HG C17orf74 ELP5 SNORA48 DLG4 LOC100996842 ZBTB4 CLEC10A NEURL4 KCTD11 PHF23 ACADVL SPEM1 TMEM256-PLSCR3 MPDU1 SNORD10 FGF11 FXR2 C17orf49 ATP1B2 CHRNB1 TNK1 POLR2A TMEM102 ACAP1 RNASEK-C17orf49 MIR324 RNASEK TNFSF12-TNFSF13 SLC16A13 LOC107983988 DVL2 ALOX12-AS1 CTDNEP1 BCL6B GPS2 EIF4A1 SLC2A4 CLDN7 TNFSF12 YBX2 TP53 SHBG TNFSF13 MIR497 ALOX12 SOX15 SENP3-EIF4A1 NLGN2 ASGR1 SAT2 SENP3 GABARAP ASGR2 |
nsv1963 | Chr.17:7244585 - 7333855 on Build GRCh38 | Deletion | NEURL4 EIF5A SLC2A4 CLDN7 YBX2 ELP5 CTDNEP1 GPS2 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |