Hs05457642_cn

• Gene Symbol: SNX29
• Assay Reference Genome Location: Chr.16:11978673 on build GRCh38
• Cytoband: 16p13.13

Target Gene Details

• Entrez Gene ID: 92017
• Gene Name: sorting nexin 29
• Gene Aliases: A-388D4.1, RUNDC2A
• Location: Chr.16:11976734-12574289 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SNX29	NM_032167.4			NP_115543.3
	XM_017023872.1			XP_016879361.1
	XM_017023874.1			XP_016879363.1
	XM_017023877.1			XP_016879366.1
	AK022425.1			BAB14033.1
	AK097928.1	1	1920
	AL135642.1
	HY078299.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1043959	Chr.16:11945489 - 12191412 on Build GRCh38	Gain	LOC642696 SNX29 TNFRSF17
nsv571458	Chr.16:11831151 - 11993425 on Build GRCh38	Gain	LOC729978 GSPT1 RSL1D1 SNX29 TNFRSF17
nsv527197	Chr.16:11977484 - 11979943 on Build GRCh38	Loss	SNX29

More Information

Additional Information:

For this assay, SNP(s) [rs202234692] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Function(s)

phosphatidylinositol binding