Assay Details
Target Gene Details
Entrez Gene ID: | 3687 |
Gene Name: | integrin subunit alpha X |
Gene Aliases: |
CD11C, SLEB6 |
Location: |
Chr.16:31355134-31382997 on Build GRCh38 |
Assay Gene Location: | Within Intron 20 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
ITGAX | NM_000887.4 | NP_000878.2 | ||
NM_001286375.1 | NP_001273304.1 | |||
XM_011545852.1 | XP_011544154.1 | |||
AK074047.1 | BAB84873.1 | |||
BC038237.1 | AAH38237.1 | |||
M81695.1 | AAA59180.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2714194 | Chr.16:31362156 - 31410550 on Build GRCh38 | Deletion | ITGAX ITGAD |
nsv1059610 | Chr.16:31357378 - 31410339 on Build GRCh38 | Gain | ITGAX ITGAD |
nsv833194 | Chr.16:31346858 - 31517224 on Build GRCh38 | Loss | C16orf58 ARMC5 ITGAX COX6A2 SLC5A2 LOC105371171 ZNF843 TGFB1I1 ITGAD |
nsv1061980 | Chr.16:31327141 - 31404150 on Build GRCh38 | Gain | ITGAX ITGAM ITGAD |
dgv503e214 | Chr.16:31332171 - 31413104 on Build GRCh38 | Gain | ITGAX ITGAM ITGAD |
More Information
Additional Information:
For this assay, SNP(s) [rs74015515] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |