Hs05441557_cn

• Gene Symbol: CDH15
• Assay Reference Genome Location: Chr.16:89178764 on build GRCh38
• Cytoband: 16q24.3

Target Gene Details

• Entrez Gene ID: 1013
• Gene Name: cadherin 15
• Gene Aliases: CDH14, CDH3, CDHM, MCAD, MRD3
• Location: Chr.16:89171755-89195492 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CDH15	NM_004933.2			NP_004924.1
	AK308596.1
	AK308631.1
	BC008951.2			AAH08951.1
	D83542.1			BAA12012.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv509638	Chr.16:89152681 - 89296203 on Build GRCh38	Insertion	LOC105371414 ZNF778 LINC00304 CDH15 ANKRD11 ACSF3 SLC22A31 LOC400558
nsv952072	Chr.16:89032193 - 89201992 on Build GRCh38	Deletion	LINC00304 CDH15 ACSF3 SLC22A31 LOC400558
nsv573727	Chr.16:89169527 - 89193067 on Build GRCh38	Loss	CDH15
nsv1063024	Chr.16:88707330 - 89238482 on Build GRCh38	Gain	LOC101927793 PIEZO1 ZNF778 LOC100129697 ACSF3 LOC339059 APRT LOC400558 CBFA2T3 GALNS CTU2 LINC00304 TRAPPC2L LOC107987238 LOC105371409 LOC100289580 CDH15 PABPN1L MIR4722 SLC22A31 CDT1
nsv471115	Chr.16:88801844 - 89197442 on Build GRCh38	Loss	LOC101927793 LOC100129697 ACSF3 APRT LOC400558 CBFA2T3 GALNS LINC00304 TRAPPC2L LOC107987238 LOC105371409 CDH15 PABPN1L SLC22A31 CDT1
nsv573720	Chr.16:88968841 - 89184474 on Build GRCh38	Gain	CBFA2T3 LINC00304 CDH15 ACSF3 LOC400558
nsv573724	Chr.16:89100686 - 89217401 on Build GRCh38	Loss	ZNF778 LINC00304 CDH15 ACSF3 SLC22A31 LOC400558
nsv573674	Chr.16:88738775 - 89325907 on Build GRCh38	Gain	LOC101927793 PIEZO1 LOC105371414 ZNF778 LOC100129697 ANKRD11 ACSF3 LOC339059 APRT LOC400558 CBFA2T3 GALNS LINC00304 TRAPPC2L LOC107987238 LOC105371409 LOC100289580 LOC100287036 CDH15 PABPN1L SLC22A31 CDT1
dgv3066n100	Chr.16:89067685 - 89301626 on Build GRCh38	Gain	LOC105371414 ZNF778 LINC00304 CDH15 ANKRD11 ACSF3 SLC22A31 LOC400558
nsv482951	Chr.16:88633593 - 90228345 on Build GRCh38	Loss	VPS9D1-AS1 CDK10 LOC100129697 AFG3L1P RPL13 GALNS VPS9D1 SLC22A31 CDT1 SNAI3-AS1 ANKRD11 TUBB8P7 ACSF3 SPATA2L CENPBD1 TCF25 CTU2 LOC105371409 LOC100289580 MC1R LOC105371419 MIR4722 CPNE7 TUBB3 PIEZO1 ZNF778 DEF8 CHMP1A CBFA2T3 SPATA33 SPG7 FAM157C URAHP DBNDD1 TRAPPC2L LOC107987238 SNORD68 CDH15 LOC107984817 PRDM7 RNF166 SNAI3 GAS8-AS1 LOC101927793 FANCA LOC105371414 LOC101927817 DPEP1 MVD SPIRE2 ZNF276 IL17C LOC339059 APRT LOC400558 CYBA LINC00304 LOC100287036 GAS8 PABPN1L
dgv5320n54	Chr.16:89114475 - 89197443 on Build GRCh38	Loss	LINC00304 CDH15 ACSF3 SLC22A31 LOC400558

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

cadherin

Gene Ontology Categories:

Process(es)

cell adhesion
homophilic cell adhesion via plasma membrane adhesion molecules
adherens junction organization
positive regulation of muscle cell differentiation

Function(s)

calcium ion binding
protein binding