Hs05437093_cn

• Gene Symbol: CDH3
• Assay Reference Genome Location: Chr.16:68653091 on build GRCh38
• Cytoband: 16q22.1

Target Gene Details

• Entrez Gene ID: 1001
• Gene Name: cadherin 3
• Gene Aliases: CDHP, HJMD, PCAD
• Location: Chr.16:68644820-68727573 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CDH3	NM_001317195.1			NP_001304124.1
	NM_001317196.1			NP_001304125.1
	NM_001793.5			NP_001784.2
	XM_011522800.2			XP_011521102.1
	AK225396.1
	AK296968.1
	AK312554.1
	BC014462.1
	BC041846.1			AAH41846.1
	X63629.1			CAA45177.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833267	Chr.16:68648596 - 68823901 on Build GRCh38	Gain	CDH3 CDH1
nsv457515	Chr.16:68564104 - 68890598 on Build GRCh38	Gain	TANGO6 ZFP90 CDH3 CDH1
esv3638908	Chr.16:68650399 - 68653321 on Build GRCh38	Loss	CDH3
esv2668844	Chr.16:68650341 - 68653273 on Build GRCh38	Deletion	CDH3
nsv572909	Chr.16:68607485 - 68678827 on Build GRCh38	Gain	CDH3

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

cadherin

Gene Ontology Categories:

Process(es)

retina homeostasis
cell adhesion
homophilic cell adhesion via plasma membrane adhesion molecules
visual perception
positive regulation of gene expression
positive regulation of keratinocyte proliferation
single organismal cell-cell adhesion
hair cycle process
keratinization
positive regulation of monophenol monooxygenase activity
negative regulation of transforming growth factor beta2 production
adherens junction organization
wound healing
response to drug
positive regulation of insulin-like growth factor receptor signaling pathway
positive regulation of melanin biosynthetic process
negative regulation of catagen
canonical Wnt signaling pathway
regulation of hair cycle by canonical Wnt signaling pathway
positive regulation of melanosome transport

Function(s)

molecular_function
calcium ion binding