Assay Details
Target Gene Details
Entrez Gene ID: | 23199 |
Gene Name: | Gse1 coiled-coil protein |
Gene Aliases: |
CRHSP24, KIAA0182 |
Location: |
Chr.16:85169512-85676206 on Build GRCh38 |
Assay Gene Location: | Within Intron 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GSE1 | XM_005255859.4 | XP_005255916.3 | ||
XM_005255860.3 | XP_005255917.3 | |||
XM_005255861.4 | XP_005255918.3 |
Target Gene Details
Entrez Gene ID: | 197196 |
Gene Name: | long intergenic non-protein coding RNA 311 |
Gene Aliases: |
NCRNA00311, TMEM148 |
Location: |
Chr.16:85282958-85288082 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LINC00311 | NR_038859.1 | |||
BC030801.1 | AAH30801.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1063498 | Chr.16:85218793 - 85287509 on Build GRCh38 | Loss | LINC00311 GSE1 |
nsv833313 | Chr.16:85282402 - 85458317 on Build GRCh38 | Loss | LINC00311 MIR5093 GSE1 |
nsv952062 | Chr.16:85245895 - 85668994 on Build GRCh38 | Deletion | LINC00311 MIR5093 GSE1 |
nsv833312 | Chr.16:85158268 - 85327826 on Build GRCh38 | Loss | LINC00311 MIR5093 GSE1 |
nsv483044 | Chr.16:84166395 - 87066394 on Build GRCh38 | Gain | LOC146513 FLJ30679 ZDHHC7 FOXL1 FOXC2 LOC400548 DNAAF1 COTL1 IRF8 TAF1C WFDC1 ADAD2 COX4I1 KCNG4 LOC105376777 MIR6774 LINC00917 TLDC1 EMC8 FENDRR FAM92B FOXF1 LOC101928557 FOXC2-AS1 LINC01082 KIAA0513 LOC101928614 C16orf74 MIR5093 MIR1910 MTHFSD LOC102724344 LOC101928474 GSE1 GINS2 LINC01081 LOC440390 LINC00311 CRISPLD2 ATP2C2 LOC105371374 KLHL36 USP10 |
More Information
Additional Information:
For this assay, SNP(s) [rs143245313] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |