Assay Details
Target Gene Details
Entrez Gene ID: | 1013 |
Gene Name: | cadherin 15 |
Gene Aliases: |
CDH14, CDH3, CDHM, MCAD, MRD3 |
Location: |
Chr.16:89171755-89195492 on Build GRCh38 |
Assay Gene Location: | Within Intron 7 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CDH15 | NM_004933.2 | NP_004924.1 | ||
BC008951.2 | AAH08951.1 | |||
D83542.1 | BAA12012.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv952072 | Chr.16:89032193 - 89201992 on Build GRCh38 | Deletion | LOC400558 ACSF3 LINC00304 SLC22A31 CDH15 |
nsv1063024 | Chr.16:88707330 - 89238482 on Build GRCh38 | Gain | CTU2 LOC100129697 LOC339059 APRT PIEZO1 CBFA2T3 TRAPPC2L CDH15 LOC105371409 CDT1 PABPN1L ZNF778 LOC100289580 LOC400558 LOC101927793 ACSF3 LINC00304 LOC107987238 SLC22A31 MIR4722 GALNS |
nsv471115 | Chr.16:88801844 - 89197442 on Build GRCh38 | Loss | LOC100129697 APRT CBFA2T3 TRAPPC2L CDH15 LOC105371409 CDT1 PABPN1L LOC400558 LOC101927793 ACSF3 LINC00304 LOC107987238 SLC22A31 GALNS |
nsv573724 | Chr.16:89100686 - 89217401 on Build GRCh38 | Loss | LOC400558 ACSF3 LINC00304 SLC22A31 CDH15 ZNF778 |
nsv573674 | Chr.16:88738775 - 89325907 on Build GRCh38 | Gain | LOC100129697 LOC339059 APRT PIEZO1 CBFA2T3 TRAPPC2L CDH15 LOC105371409 CDT1 PABPN1L LOC100287036 ZNF778 LOC100289580 LOC400558 LOC101927793 ACSF3 LINC00304 LOC107987238 SLC22A31 LOC105371414 ANKRD11 GALNS |
dgv3066n100 | Chr.16:89067685 - 89301626 on Build GRCh38 | Gain | LOC400558 ACSF3 LINC00304 SLC22A31 CDH15 LOC105371414 ANKRD11 ZNF778 |
nsv1078407 | Chr.16:89186791 - 89191492 on Build GRCh38 | Duplication | CDH15 |
nsv482951 | Chr.16:88633593 - 90228345 on Build GRCh38 | Loss | VPS9D1-AS1 PRDM7 SNAI3 SNORD68 URAHP LOC100129697 PIEZO1 RPL13 SPATA2L CHMP1A RNF166 CDT1 GAS8 LOC100287036 ACSF3 CENPBD1 SLC22A31 SPATA33 CTU2 GAS8-AS1 TUBB8P7 ZNF276 DPEP1 CDH15 TCF25 SPG7 DEF8 LOC400558 LOC107987238 MC1R FAM157C MIR4722 ANKRD11 SNAI3-AS1 LOC339059 APRT TRAPPC2L LOC105371409 PABPN1L ZNF778 TUBB3 LOC101927817 LOC101927793 CDK10 VPS9D1 LOC105371414 CPNE7 CBFA2T3 LOC100289580 AFG3L1P LINC00304 LOC105371419 IL17C CYBA DBNDD1 SPIRE2 LOC107984817 GALNS MVD FANCA |
esv2763149 | Chr.16:89179547 - 89368114 on Build GRCh38 | Gain | SLC22A31 CDH15 LOC105371414 ANKRD11 LOC100287036 ZNF778 |
dgv5320n54 | Chr.16:89114475 - 89197443 on Build GRCh38 | Loss | LOC400558 ACSF3 LINC00304 SLC22A31 CDH15 |
nsv509638 | Chr.16:89152681 - 89296203 on Build GRCh38 | Insertion | LOC400558 ACSF3 LINC00304 SLC22A31 CDH15 LOC105371414 ANKRD11 ZNF778 |
nsv573727 | Chr.16:89169527 - 89193067 on Build GRCh38 | Loss | CDH15 |
nsv1141297 | Chr.16:89182392 - 89191792 on Build GRCh38 | Duplication | CDH15 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |