Hs05238530_cn

• Gene Symbol: CADM1
• Assay Reference Genome Location: Chr.11:115187214 on build GRCh38
• Cytoband: 11q23.3

Target Gene Details

• Entrez Gene ID: 23705
• Gene Name: cell adhesion molecule 1
• Gene Aliases: BL2, IGSF4, IGSF4A, NECL2, Necl-2, RA175, ST17, SYNCAM, TSLC1, sTSLC-1, sgIGSF, synCAM1
• Location: Chr.11:115173625-115504523 on Build GRCh38
• Assay Gene Location: Within Intron 14

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CADM1	NM_001098517.1			NP_001091987.1
	NM_001301043.1			NP_001287972.1
	NM_001301044.1			NP_001287973.1
	NM_001301045.1			NP_001287974.1
	NM_014333.3			NP_055148.3
	XM_005271494.2			XP_005271551.1
	XM_017017457.1			XP_016872946.1
	XM_017017458.1			XP_016872947.1
	XM_017017459.1			XP_016872948.1
	XM_017017460.1			XP_016872949.1
	XM_017017461.1			XP_016872950.1
	AF132811.1			AAF69029.1
	AK075502.1			BAC11657.1
	AK315245.1
	AY309502.1			AAQ81866.1
	AY358334.1			AAQ88700.1
	BC047021.1			AAH47021.1
	BC125102.1
	BC125103.1
	BX647110.1
	CR457157.1			CAG33438.1
	HE586496.1
	HE586497.1
	HE586498.1
	HE586499.1
	HE586500.1
	HE586501.1
	HE586503.1
	KJ534791.1
	KJ534792.1
	KJ534793.1
	KJ534794.1
	KJ534795.1
	KJ534796.1
	KJ534797.1

More Information

Additional Information:

For this assay, SNP(s) [rs79939718] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, non-DGV Variation

Gene Ontology Categories:

Process(es)

T cell mediated cytotoxicity
apoptotic process
homophilic cell adhesion via plasma membrane adhesion molecules
heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
multicellular organism development
spermatogenesis
cell recognition
cell differentiation
adherens junction organization
susceptibility to natural killer cell mediated cytotoxicity
positive regulation of natural killer cell mediated cytotoxicity
positive regulation of cytokine secretion
activated T cell proliferation
detection of stimulus

Function(s)

receptor activity
receptor binding
protein binding
PDZ domain binding
protein homodimerization activity
cell adhesion molecule binding