Assay Details
Target Gene Details
Entrez Gene ID: | 9328 |
Gene Name: | general transcription factor IIIC subunit 5 |
Gene Aliases: |
TFIIIC63, TFIIICepsilon, TFiiiC2-63 |
Location: |
Chr.9:133030675-133058503 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GTF3C5 | NM_001122823.1 | NP_001116295.1 | ||
NM_001286709.1 | NP_001273638.1 | |||
NM_012087.3 | NP_036219.2 | |||
XM_005272234.3 | XP_005272291.1 | |||
XM_011519201.1 | XP_011517503.1 | |||
XM_017015315.1 | XP_016870804.1 | |||
XM_017015316.1 | XP_016870805.1 | |||
AF133124.1 | AAD41476.1 | |||
AJ420443.1 | ||||
AK000194.1 | BAA91001.1 | |||
AK055092.1 | ||||
AK097295.1 | BAC04993.1 | |||
AK225761.1 | ||||
AK293980.1 | ||||
AK311481.1 | ||||
AY007123.1 | AAG01991.1 | |||
BC011355.1 | AAH11355.1 | |||
BC017337.2 | AAH17337.1 | |||
BC030157.2 | AAH30157.2 | |||
BQ673969.1 | ||||
DB194811.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2739138 | Chr.9:132727483 - 135521553 on Build GRCh38 | Deletion | LINC00094 REXO4 OBP2B COL5A1 ADAMTS13 SLC2A6 MED22 ADAMTSL2 GBGT1 MIR548AW MIR3689D2 GFI1B SURF6 DBH CACFD1 C9orf62 SNORD141A RXRA MIR3689F MIR3689A WDR5 ABO STKLD1 LOC101928193 SURF4 MIR3689C FCN1 AK8 MRPS2 SNORD36A SURF1 SNORD36B TSC1 MIR3689B SPACA9 LOC101448202 SNORD24 SARDH PPP1R26 MIR6877 LCN1 SNORD36C LOC101928525 VAV2 LOC105376306 RPL7A TMEM8C LOC100130548 COL5A1-AS1 MIR4669 RNU6ATAC FCN2 DBH-AS1 BRD3 GTF3C5 MIR3689E OLFM1 RALGDS PPP1R26-AS1 FAM163B CEL LOC401557 SURF2 CELP LOC100996574 MIR3689D1 C9orf116 |
nsv615596 | Chr.9:133030314 - 133080285 on Build GRCh38 | Loss | MIR6877 CEL LOC105376306 GTF3C5 LOC100996574 |
nsv831744 | Chr.9:132980050 - 133174043 on Build GRCh38 | Gain+Loss | RALGDS MIR6877 CEL SNORD141A LOC105376306 GTF3C5 GBGT1 CELP LOC100996574 GFI1B |
nsv508564 | Chr.9:133013830 - 133073076 on Build GRCh38 | Deletion | MIR6877 CEL SNORD141A LOC105376306 GTF3C5 LOC100996574 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |