Assay Details
Target Gene Details
Entrez Gene ID: | 2050 |
Gene Name: | EPH receptor B4 |
Gene Aliases: |
HTK, MYK1, TYRO11 |
Location: |
Chr.7:100802565-100827521 on Build GRCh38 |
Assay Gene Location: | Within Intron 16 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
EPHB4 | NM_004444.4 | NP_004435.3 | ||
XM_017011816.1 | XP_016867305.1 | |||
AB209644.1 | BAD92881.1 | |||
AK301224.1 | ||||
AY056048.1 | AAL14195.1 | |||
BC004264.1 | AAH04264.1 | |||
BC052804.1 | AAH52804.1 | |||
U07695.1 | AAA20598.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2759547 | Chr.7:100757867 - 101105965 on Build GRCh38 | Gain+Loss | MIR6875 MUC3A MUC12 SLC12A9 EPHB4 UFSP1 MUC17 LOC102724094 ACHE SRRT TRIP6 TRIM56 ZAN |
nsv470381 | Chr.7:100642568 - 100834358 on Build GRCh38 | Loss | GIGYF1 GNB2 TFR2 EPHB4 LOC105375429 EPO ACTL6B ZAN POP7 |
esv2734888 | Chr.7:99975623 - 101290285 on Build GRCh38 | Deletion | MIR4658 GNB2 NYAP1 CLDN15 EPO ACTL6B SPDYE3 LOC102724094 MIR106B ACHE MIR25 FBXO24 FIS1 CNPY4 TAF6 TRIM56 PILRA ZAN POP7 ZNF3 GIGYF1 AGFG2 SLC12A9 MOGAT3 LAMTOR4 LOC105375429 MIR6840 TSC22D4 SAP25 UFSP1 MBLAC1 SERPINE1 C7orf61 ZCWPW1 AP1S1 GAL3ST4 STAG3 MIR93 PILRB ZKSCAN1 MIR6875 GPC2 NAT16 PVRIG PVRIG2P STAG3L5P ZNHIT1 TFR2 MOSPD3 MUC17 PCOLCE-AS1 MEPCE SRRT MCM7 STAG3L5P-PVRIG2P-PILRB PPP1R35 COPS6 AZGP1 PMS2P1 PLOD3 C7orf43 AP4M1 MUC3A MUC12 ZASP VGF AZGP1P1 EPHB4 LRCH4 MIR4653 GATS TRIP6 PCOLCE ZSCAN21 |
nsv607965 | Chr.7:100776465 - 100899511 on Build GRCh38 | Loss | ACHE MIR6875 SRRT SLC12A9 TRIP6 EPHB4 UFSP1 ZAN |
nsv1020837 | Chr.7:100715499 - 100911015 on Build GRCh38 | Loss | ACHE MIR6875 SRRT SLC12A9 TRIP6 EPHB4 EPO UFSP1 ZAN |
nsv951388 | Chr.7:100741378 - 100838178 on Build GRCh38 | Deletion | EPHB4 ZAN |
More Information
Additional Information:
For this assay, SNP(s) [rs77093870] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |