Assay Details
Target Gene Details
Entrez Gene ID: | 101928371 |
Gene Name: | uncharacterized LOC101928371 |
Gene Aliases: |
- |
Location: |
Chr.2:88538720-88575610 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LOC101928371 | NR_110236.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv470476 | Chr.2:88384248 - 88829483 on Build GRCh38 | Gain | EIF2AK3 ANKRD36BP2 LOC101928371 TEX37 FOXI3 LOC101928403 MIR4436A RPIA |
dgv61n16 | Chr.2:87343737 - 90254660 on Build GRCh38 | Deletion | FABP1 IGKV2-29 SMYD1 FOXI3 PLGLB2 IGKC LOC101928403 MIR4436A MIR4780 IGKV3D-15 IGKV1-5 LOC107985911 LOC101928371 IGKV1D-8 RPIA IGKV3-20 ANKRD36BP2 KRCC1 THNSL2 IGKV2-26 IGKV1D-13 RGPD2 LINC00152 EIF2AK3 LOC730268 TEX37 MIR4435-1 IGK IGKV2-24 LOC101927050 |
dgv6947n54 | Chr.2:87815738 - 88850700 on Build GRCh38 | Gain | ANKRD36BP2 FABP1 KRCC1 THNSL2 SMYD1 FOXI3 LOC101928403 MIR4436A RGPD2 MIR4780 EIF2AK3 LOC101928371 TEX37 RPIA |
nsv1072005 | Chr.2:87360367 - 90256528 on Build GRCh38 | Deletion | FABP1 IGKV2-29 SMYD1 FOXI3 PLGLB2 IGKC LOC101928403 MIR4436A MIR4780 IGKV3D-15 IGKV1-5 LOC107985911 LOC101928371 IGKV1D-8 RPIA IGKV3-20 ANKRD36BP2 KRCC1 THNSL2 IGKV2-26 IGKV1D-13 RGPD2 LINC00152 EIF2AK3 LOC730268 TEX37 MIR4435-1 IGK IGKV2-24 LOC101927050 |
nsv1130752 | Chr.2:87360364 - 90256525 on Build GRCh38 | Deletion | FABP1 IGKV2-29 SMYD1 FOXI3 PLGLB2 IGKC LOC101928403 MIR4436A MIR4780 IGKV3D-15 IGKV1-5 LOC107985911 LOC101928371 IGKV1D-8 RPIA IGKV3-20 ANKRD36BP2 KRCC1 THNSL2 IGKV2-26 IGKV1D-13 RGPD2 LINC00152 EIF2AK3 LOC730268 TEX37 MIR4435-1 IGK IGKV2-24 LOC101927050 |
nsv582387 | Chr.2:88318068 - 88545622 on Build GRCh38 | Gain | LOC101928371 TEX37 FOXI3 |
nsv582384 | Chr.2:87987149 - 88773214 on Build GRCh38 | Loss | ANKRD36BP2 FABP1 KRCC1 THNSL2 SMYD1 FOXI3 LOC101928403 RGPD2 MIR4780 EIF2AK3 LOC101928371 TEX37 RPIA |
nsv582386 | Chr.2:88035188 - 89208087 on Build GRCh38 | Loss | IGKV3-20 ANKRD36BP2 FABP1 KRCC1 THNSL2 IGKV2-26 SMYD1 FOXI3 IGKC LOC101928403 MIR4436A MIR4780 EIF2AK3 IGKV1-5 LOC101928371 TEX37 IGK IGKV2-24 RPIA |
More Information
Additional Information:
For this assay, SNP(s) [rs79576019] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |