Hs04422650_cn

• Gene Symbol: GPC5
• Assay Reference Genome Location: Chr.13:92714728 on build GRCh38
• Cytoband: 13q31.3

Target Gene Details

• Entrez Gene ID: 2262
• Gene Name: glypican 5
• Gene Aliases: -
• Location: Chr.13:91398619-92867237 on Build GRCh38
• Assay Gene Location: Within Intron 11

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GPC5	NM_004466.5			NP_004457.1
	XM_017020435.1			XP_016875924.1
	AF001462.1			AAC12261.1
	AK312815.1
	BC039730.1			AAH39730.1
	U66033.1			AAC51118.1

Target Gene Details

• Entrez Gene ID: 100873969
• Gene Name: GPC5 antisense RNA 1
• Gene Aliases: -
• Location: Chr.13:92701389-92721614 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GPC5-AS1	NR_046520.1
	NR_049775.1
	NR_049776.1
	BF942055.1
	BI116573.1
	CK904642.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3582694	Chr.13:91877905 - 93587318 on Build GRCh38	Gain	LINC00363 GPC6 GPC5-AS2 GPC5-AS1 GPC5 MIR548AS
esv3892425	Chr.13:92629860 - 93065551 on Build GRCh38	Gain	LINC00363 GPC5-AS1 GPC5
nsv562745	Chr.13:92627310 - 92725309 on Build GRCh38	Gain	GPC5-AS1 GPC5

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

retinoid metabolic process
glycosaminoglycan biosynthetic process
glycosaminoglycan catabolic process
glycosaminoglycan metabolic process

Function(s)

heparan sulfate proteoglycan binding