Assay Details
Target Gene Details
Entrez Gene ID: | 59307 |
Gene Name: | single Ig and TIR domain containing |
Gene Aliases: |
IL-1R8, TIR8 |
Location: |
Chr.11:405716-417454 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 2 - Exon 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SIGIRR | NM_001135053.1 | NP_001128525.1 | ||
NM_001135054.1 | NP_001128526.1 | |||
NM_021805.2 | NP_068577.2 | |||
XM_005253044.2 | XP_005253101.1 | |||
XM_005253045.1 | XP_005253102.1 | |||
XM_005253046.1 | XP_005253103.1 | |||
XM_005253048.4 | XP_005253105.1 | |||
XM_017018099.1 | XP_016873588.1 | |||
XM_017018100.1 | XP_016873589.1 | |||
AK025099.1 | BAB15066.1 | |||
AK093427.1 | ||||
AK172830.1 | BAD18795.1 | |||
BC025953.1 | AAH25953.1 | |||
BC106007.1 | AAI06008.1 | |||
DA963481.1 | ||||
DB112269.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv527327 | Chr.11:295343 - 620599 on Build GRCh38 | Loss | IFITM2 LRRC56 ANO9 IFITM1 CDHR5 B4GALNT4 SIGIRR PTDSS2 LOC143666 PKP3 IFITM5 MIR210 IFITM3 HRAS RNH1 RASSF7 IRF7 LMNTD2 MIR210HG LOC101059906 PGGHG PHRF1 |
nsv469923 | Chr.11:378188 - 1302334 on Build GRCh38 | Loss | EPS8L2 ANO9 CDHR5 DRD4 CRACR2B B4GALNT4 PTDSS2 CD151 POLR2L TSPAN4 MIR210 HRAS RASSF7 MIR6744 TOLLIP CHID1 LMNTD2 PIDD1 LOC101927503 TMEM80 LOC101059906 LRRC56 PNPLA2 PDDC1 LOC171391 AP2A2 RPLP2 MUC6 TALDO1 SIGIRR MUC5AC MUC5B LOC143666 PKP3 DEAF1 SCT RNH1 SNORA52 SLC25A22 IRF7 PANO1 MUC2 MIR210HG CEND1 PHRF1 |
nsv552776 | Chr.11:366710 - 432436 on Build GRCh38 | Loss | ANO9 B4GALNT4 SIGIRR PKP3 |
nsv552826 | Chr.11:412626 - 431606 on Build GRCh38 | Gain | ANO9 SIGIRR |
nsv552825 | Chr.11:412505 - 431554 on Build GRCh38 | Gain+Loss | ANO9 SIGIRR |
esv2759794 | Chr.11:409846 - 1336162 on Build GRCh38 | Loss | EPS8L2 ANO9 CDHR5 DRD4 CRACR2B PTDSS2 CD151 TOLLIP-AS1 POLR2L TSPAN4 MIR210 HRAS RASSF7 MIR6744 TOLLIP CHID1 LMNTD2 PIDD1 LOC101927503 TMEM80 LOC101059906 LRRC56 PNPLA2 PDDC1 LOC171391 AP2A2 RPLP2 MUC6 TALDO1 SIGIRR MUC5AC MUC5B LOC143666 DEAF1 SCT RNH1 SNORA52 SLC25A22 IRF7 PANO1 MUC2 MIR210HG CEND1 PHRF1 |
esv3891907 | Chr.11:409815 - 424291 on Build GRCh38 | Loss | ANO9 SIGIRR |
nsv951268 | Chr.11:368601 - 503700 on Build GRCh38 | Deletion | ANO9 RNH1 B4GALNT4 SIGIRR PTDSS2 PKP3 |
nsv552770 | Chr.11:356090 - 444628 on Build GRCh38 | Gain | ANO9 B4GALNT4 SIGIRR PKP3 |
dgv1505n54 | Chr.11:198510 - 470331 on Build GRCh38 | Gain | IFITM2 ANO9 IFITM1 ODF3 B4GALNT4 SIGIRR PTDSS2 PKP3 IFITM5 MIR6743 IFITM3 RIC8A PSMD13 NLRP6 SIRT3 BET1L PGGHG |
nsv1159790 | Chr.11:340219 - 491334 on Build GRCh38 | Deletion | ANO9 B4GALNT4 SIGIRR PTDSS2 PKP3 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | EPS8L2 ANO9 CDHR5 DRD4 CRACR2B B4GALNT4 PTDSS2 CD151 POLR2L TSPAN4 MIR210 HRAS RASSF7 CHID1 LMNTD2 PIDD1 TMEM80 LOC101059906 LRRC56 PNPLA2 PDDC1 LOC171391 AP2A2 RPLP2 TALDO1 SIGIRR LOC143666 PKP3 DEAF1 SCT RNH1 SNORA52 SLC25A22 IRF7 PANO1 MIR210HG CEND1 PHRF1 |
More Information
Set Membership: |
Intragenic Non-exonic DGV Variation |