Assay Details
Target Gene Details
Entrez Gene ID: | 10522 |
Gene Name: | DEAF1, transcription factor |
Gene Aliases: |
MRD24, NUDR, SPN, ZMYND5 |
Location: |
Chr.11:644220-695754 on Build GRCh38 |
Assay Gene Location: | Within Intron 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
DEAF1 | NM_001293634.1 | NP_001280563.1 | ||
NM_021008.3 | NP_066288.2 | |||
XM_011519842.2 | XP_011518144.1 | |||
AB209831.1 | BAD93068.1 | |||
AF007165.1 | AAB62704.1 | |||
AF049459.1 | AAC79676.1 | |||
AF049460.1 | AAC79677.1 | |||
AF068892.1 | AAC25714.1 | |||
AF068893.1 | AAC25715.1 | |||
AF068894.1 | AAC25716.1 | |||
AF068895.1 | AAC25717.1 | |||
AF068896.1 | AAC25718.1 | |||
AF068897.1 | AAC25719.1 | |||
AK289873.1 | ||||
AK291383.1 | ||||
BC053322.1 | AAH53322.1 | |||
FJ985253.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv469923 | Chr.11:378188 - 1302334 on Build GRCh38 | Loss | PHRF1 SCT PTDSS2 CHID1 SNORA52 MIR210 ANO9 CRACR2B HRAS TALDO1 B4GALNT4 IRF7 LMNTD2 RNH1 MIR6744 DEAF1 TMEM80 LOC101059906 TSPAN4 MUC2 PKP3 PIDD1 POLR2L DRD4 MIR210HG PDDC1 LOC101927503 MUC5AC CEND1 CDHR5 MUC5B SLC25A22 EPS8L2 RASSF7 MUC6 TOLLIP LRRC56 PNPLA2 LOC143666 RPLP2 LOC171391 CD151 PANO1 AP2A2 SIGIRR |
esv2743861 | Chr.11:664235 - 664895 on Build GRCh38 | Deletion | DEAF1 |
dgv124e201 | Chr.11:664307 - 665458 on Build GRCh38 | Deletion | DEAF1 |
nsv832043 | Chr.11:631027 - 758602 on Build GRCh38 | Loss | EPS8L2 DRD4 DEAF1 TMEM80 TALDO1 |
esv2759794 | Chr.11:409846 - 1336162 on Build GRCh38 | Loss | PHRF1 SCT PTDSS2 CHID1 SNORA52 MIR210 ANO9 CRACR2B HRAS TALDO1 IRF7 LMNTD2 RNH1 MIR6744 DEAF1 TMEM80 LOC101059906 TSPAN4 MUC2 PIDD1 POLR2L DRD4 MIR210HG PDDC1 LOC101927503 MUC5AC CEND1 CDHR5 MUC5B SLC25A22 TOLLIP-AS1 EPS8L2 RASSF7 MUC6 TOLLIP LRRC56 PNPLA2 LOC143666 RPLP2 LOC171391 CD151 PANO1 AP2A2 SIGIRR |
nsv1039558 | Chr.11:534242 - 672091 on Build GRCh38 | Gain | PHRF1 SCT DRD4 MIR210HG MIR210 HRAS CDHR5 IRF7 RASSF7 LMNTD2 LRRC56 DEAF1 LOC143666 |
nsv1053964 | Chr.11:491334 - 692433 on Build GRCh38 | Gain | PHRF1 SCT PTDSS2 DRD4 MIR210HG MIR210 HRAS CDHR5 IRF7 RASSF7 LMNTD2 RNH1 LRRC56 DEAF1 LOC143666 LOC101059906 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | PHRF1 SCT PTDSS2 CHID1 SNORA52 MIR210 ANO9 CRACR2B HRAS TALDO1 B4GALNT4 IRF7 LMNTD2 RNH1 DEAF1 TMEM80 LOC101059906 TSPAN4 PKP3 PIDD1 POLR2L DRD4 MIR210HG PDDC1 CEND1 CDHR5 SLC25A22 EPS8L2 RASSF7 LRRC56 PNPLA2 LOC143666 RPLP2 LOC171391 CD151 PANO1 AP2A2 SIGIRR |
dgv1525n54 | Chr.11:647869 - 688312 on Build GRCh38 | Loss | DEAF1 |
nsv1159791 | Chr.11:461793 - 909492 on Build GRCh38 | Deletion | PHRF1 SCT PTDSS2 CHID1 SNORA52 MIR210 CRACR2B HRAS TALDO1 IRF7 LMNTD2 RNH1 DEAF1 TMEM80 LOC101059906 TSPAN4 PIDD1 POLR2L DRD4 MIR210HG PDDC1 CEND1 CDHR5 SLC25A22 EPS8L2 RASSF7 LRRC56 PNPLA2 LOC143666 RPLP2 LOC171391 CD151 PANO1 |
dgv543e59 | Chr.11:664352 - 665150 on Build GRCh38 | Duplication | DEAF1 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |