Hs04394900_cn

• Gene Symbol: INTS4
• Assay Reference Genome Location: Chr.11:77945846 on build GRCh38
• Cytoband: 11q14.1

Target Gene Details

• Entrez Gene ID: 92105
• Gene Name: integrator complex subunit 4
• Gene Aliases: INT4, MST093
• Location: Chr.11:77874491-77994849 on Build GRCh38
• Assay Gene Location: Within Intron 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
INTS4	NM_033547.3			NP_291025.3
	XM_011545352.2			XP_011543654.1
	XM_011545353.2			XP_011543655.1
	XM_017018560.1			XP_016874049.1
	AK290866.1
	AL834171.1
	BC008013.1			AAH08013.1
	BC009995.2			AAH09995.1
	BC015664.2			AAH15664.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv520740	Chr.11:77842592 - 78286890 on Build GRCh38	Gain	KCTD21 THRSP KCTD21-AS1 RSF1 USP35 GAB2 NDUFC2 AAMDC NDUFC2-KCTD14 INTS4 ALG8 KCTD14
nsv400	Chr.11:77943021 - 77976080 on Build GRCh38	Insertion	INTS4
nsv1050891	Chr.11:77705600 - 78076956 on Build GRCh38	Gain	THRSP RPS20P27 RSF1 NDUFC2 AAMDC NDUFC2-KCTD14 INTS4 KCTD14
nsv975205	Chr.11:77917029 - 77960334 on Build GRCh38	Duplication	INTS4
nsv8841	Chr.11:77929998 - 77981532 on Build GRCh38	Loss	INTS4

More Information

Additional Information:

For this assay, SNP(s) [rs146715923] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

snRNA processing
snRNA transcription from RNA polymerase II promoter

Function(s)

protein binding