Assay Details
Target Gene Details
Entrez Gene ID: | 100132159 |
Gene Name: | CALML3 antisense RNA 1 |
Gene Aliases: |
- |
Location: |
Chr.10:5514244-5526246 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CALML3-AS1 | NR_120496.1 | 3 | 298 | |
NR_120497.1 | 2 | 186 | ||
AK128534.1 | 1 | 1120 | BAC87486.1 | |
DA220455.1 | 2 | 188 | ||
DA770774.1 | 3 | 293 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv831774 | Chr.10:5421593 - 5615458 on Build GRCh38 | Gain | NET1 LOC105376379 LOC105376382 CALML3-AS1 CALML3 CALML5 |
dgv664n100 | Chr.10:5500146 - 5577978 on Build GRCh38 | Gain | CALML3-AS1 CALML3 |
nsv549886 | Chr.10:5163474 - 5590097 on Build GRCh38 | Loss | NET1 LOC105376379 AKR1C8P CALML3-AS1 AKR1C4 UCN3 CALML3 TUBAL3 CALML5 |
nsv1051283 | Chr.10:5463511 - 5577978 on Build GRCh38 | Gain | LOC105376379 CALML3-AS1 CALML3 CALML5 |
esv2759729 | Chr.10:5515061 - 5762817 on Build GRCh38 | Gain | LOC105376382 ASB13 CALML3-AS1 FAM208B CALML3 |
More Information
Additional Information:
For this assay, SNP(s) [rs75141420] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |