Assay Details
Target Gene Details
Entrez Gene ID: | 55326 |
Gene Name: | 1-acylglycerol-3-phosphate O-acyltransferase 5 |
Gene Aliases: |
1AGPAT5, LPAATE |
Location: |
Chr.8:6708357-6761503 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
AGPAT5 | NM_018361.3 | NP_060831.2 | ||
XM_011534751.2 | XP_011533053.1 | |||
AF375789.1 | AAK54809.1 | |||
AK002072.1 | BAA92069.1 | |||
AK310545.1 | ||||
AL136587.1 | CAB66522.1 | |||
BC023550.2 | AAH23550.1 | |||
BC068519.1 | AAH68519.1 | |||
BC080537.1 | AAH80537.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1021684 | Chr.8:6492570 - 6951933 on Build GRCh38 | Loss | ANGPT2 MIR4659B MIR4659A MCPH1 GS1-24F4.2 DEFA4 MCPH1-AS1 AGPAT5 DEFA6 MIR8055 DEFA8P DEFB1 XKR5 |
nsv610004 | Chr.8:6544845 - 6915391 on Build GRCh38 | Gain | GS1-24F4.2 MCPH1-AS1 ANGPT2 AGPAT5 MIR8055 MIR4659B DEFB1 XKR5 MIR4659A MCPH1 |
nsv1025976 | Chr.8:6615427 - 6829450 on Build GRCh38 | Loss | MCPH1-AS1 AGPAT5 MIR8055 MIR4659B XKR5 MIR4659A MCPH1 |
nsv6059 | Chr.8:6693878 - 6726740 on Build GRCh38 | Insertion | MCPH1-AS1 AGPAT5 |
esv2422383 | Chr.8:6504868 - 6924071 on Build GRCh38 | Duplication | GS1-24F4.2 MCPH1-AS1 ANGPT2 AGPAT5 MIR8055 MIR4659B DEFB1 XKR5 MIR4659A MCPH1 |
nsv831220 | Chr.8:6670324 - 6870969 on Build GRCh38 | Gain | GS1-24F4.2 MCPH1-AS1 AGPAT5 MIR4659B DEFB1 XKR5 MIR4659A |
nsv610006 | Chr.8:6710680 - 7063882 on Build GRCh38 | Gain | DEFA3 MIR4659B DEFA11P DEFA10P MIR4659A GS1-24F4.2 DEFA1B DEFA4 DEFA7P AGPAT5 DEFA6 DEFA8P DEFA9P DEFB1 DEFT1P DEFT1P2 XKR5 DEFA5 DEFA1 |
nsv1031577 | Chr.8:6712833 - 8008628 on Build GRCh38 | Gain | USP17L8 FAM66B DEFB108P1 DEFA10P LOC101929400 ZNF705G DEFB106B DEFB104B DEFB4A LOC107986910 FAM90A10P DEFB107B DEFB107A MIR4659B USP17L1 DEFA7P DEFB103B DEFB104A DEFT1P SPAG11B DEFA5 DEFB4B PRR23D2 ZNF705B DEFA11P DEFA1B OR7E154P AGPAT5 DEFA6 DEFB109P1B DEFA8P XKR5 DEFA1 FAM66E USP17L3 DEFB105A OR7E125P PRR23D1 LOC101928095 SPAG11A DEFA3 DEFB106A MIR4659A GS1-24F4.2 DEFB105B DEFA4 DEFB103A USP17L4 LINC00965 FAM90A7P DEFA9P DEFB1 DEFT1P2 |
dgv6876n100 | Chr.8:6687977 - 6812428 on Build GRCh38 | Loss | MCPH1-AS1 AGPAT5 MIR4659B XKR5 MIR4659A |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |