Assay Details
Target Gene Details
Entrez Gene ID: | 391013 |
Gene Name: | phospholipase A2 group IIC |
Gene Aliases: |
- |
Location: |
Chr.1:20163085-20177364 on Build GRCh38 |
Assay Gene Location: | Within Intron 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PLA2G2C | NM_001316722.1 | NP_001303651.1 | ||
XM_017001270.1 | XP_016856759.1 | |||
AW135717.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2674003 | Chr.1:20172236 - 20174073 on Build GRCh38 | Deletion | PLA2G2C |
esv26309 | Chr.1:20172511 - 20174305 on Build GRCh38 | Loss | PLA2G2C |
esv3585417 | Chr.1:20172265 - 20174165 on Build GRCh38 | Loss | PLA2G2C |
nsv545731 | Chr.1:19989106 - 20776306 on Build GRCh38 | Gain | KIF17 DDOST UBXN10-AS1 FAM43B CDA UBXN10 PINK1 VWA5B1 PINK1-AS MIR6084 HP1BP3 CAMK2N1 PLA2G2F LINC01141 SH2D5 PLA2G5 MUL1 PLA2G2D PLA2G2C |
More Information
Additional Information:
For this assay, SNP(s) [rs114411177] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |