Assay Details
Target Gene Details
Entrez Gene ID: | 101927401 |
Gene Name: | MAGE-like protein 2 |
Gene Aliases: |
- |
Location: |
Chr.1:228360893-228369935 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LOC101927401 | XM_011544350.2 | 1 | 507 | XP_011542652.1 |
XM_017003091.1 | 1 | 507 | XP_016858580.1 | |
XM_017003092.1 | 1 | 507 | XP_016858581.1 |
Target Gene Details
Entrez Gene ID: | 84033 |
Gene Name: | obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF |
Gene Aliases: |
ARHGEF30, UNC89 |
Location: |
Chr.1:228208013-228381431 on Build GRCh38 |
Assay Gene Location: | Within Intron 106 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv826908 | Chr.1:227707685 - 228503399 on Build GRCh38 | Gain | ARF1 MIR3620 IBA57 MIR5008 MIR4666A WNT3A IBA57-AS1 GUK1 C1orf35 SNAP47 RNF187 MRPL55 HIST3H2BB HIST3H3 LOC107985355 GJC2 LOC101927401 MIR6742 LOC101060022 OBSCN WNT9A LOC100506571 HIST3H2A PRSS38 C1orf145 JMJD4 LOC105373289 TRIM11 TRIM17 |
nsv1013500 | Chr.1:228271433 - 228713854 on Build GRCh38 | Gain | MIR4666A RNA5S1 BTNL10 RNA5S15 RNA5S4 RNA5S2 RNA5S8 RNA5S7 RNF187 RNA5S9 RNA5S6 HIST3H2BB HIST3H3 RNA5S5 RNA5S12 LOC105373132 LOC101927401 RHOU RNA5S13 RNA5S3 MIR6742 DUSP5P1 OBSCN RNA5S10 RNA5S11 RNA5S16 HIST3H2A RNA5S17 RNA5S14 TRIM11 TRIM17 |
nsv517545 | Chr.1:228268446 - 228498298 on Build GRCh38 | Loss | LOC101927401 HIST3H2A RNF187 HIST3H2BB MIR4666A HIST3H3 MIR6742 TRIM11 TRIM17 OBSCN |
esv32853 | Chr.1:227692415 - 228670462 on Build GRCh38 | Gain | IBA57 RNA5S1 RNA5S15 IBA57-AS1 RNA5S4 GUK1 C1orf35 RNA5S7 SNAP47 MRPL55 RNA5S9 HIST3H2BB LOC107985355 RNA5S5 GJC2 LOC101927401 RHOU RNA5S13 RNA5S3 MIR6742 DUSP5P1 LOC101060022 OBSCN WNT9A RNA5S11 RNA5S16 PRSS38 C1orf145 JMJD4 RNA5S14 LOC105373289 ARF1 MIR3620 MIR5008 MIR4666A BTNL10 WNT3A RNA5S2 RNA5S8 RNF187 RNA5S6 HIST3H3 RNA5S12 LOC105373132 RNA5S10 LOC100506571 HIST3H2A RNA5S17 TRIM11 TRIM17 |
nsv827019 | Chr.1:228126466 - 228463319 on Build GRCh38 | Loss | GJC2 LOC101927401 IBA57 MIR4666A MIR6742 OBSCN IBA57-AS1 GUK1 HIST3H2A C1orf145 HIST3H2BB HIST3H3 TRIM11 TRIM17 |
nsv549295 | Chr.1:228276547 - 228413937 on Build GRCh38 | Loss | LOC101927401 MIR6742 TRIM11 TRIM17 OBSCN |
nsv523935 | Chr.1:227850423 - 228494048 on Build GRCh38 | Loss | ARF1 MIR3620 IBA57 MIR5008 MIR4666A WNT3A IBA57-AS1 GUK1 C1orf35 RNF187 MRPL55 HIST3H2BB HIST3H3 LOC107985355 GJC2 LOC101927401 MIR6742 LOC101060022 OBSCN WNT9A LOC100506571 HIST3H2A C1orf145 TRIM11 TRIM17 |
nsv508697 | Chr.1:228352336 - 228434913 on Build GRCh38 | Deletion | LOC101927401 HIST3H3 MIR6742 TRIM11 TRIM17 OBSCN |
nsv952140 | Chr.1:228331100 - 228380999 on Build GRCh38 | Deletion | LOC101927401 OBSCN |
More Information
Set Membership: |
Intragenic Exonic Intronic Non-exonic DGV Variation |