Assay Details
Target Gene Details
Entrez Gene ID: | 2782 |
Gene Name: | G protein subunit beta 1 |
Gene Aliases: |
MRD42 |
Location: |
Chr.1:1785285-1891117 on Build GRCh38 |
Assay Gene Location: | Within Intron 8 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GNB1 | NM_001282538.1 | NP_001269467.1 | ||
NM_001282539.1 | NP_001269468.1 | |||
NM_002074.4 | NP_002065.1 | |||
XM_017001059.1 | XP_016856548.1 | |||
XM_017001060.1 | XP_016856549.1 | |||
XM_017001061.1 | XP_016856550.1 | |||
AF070603.1 | AAC28655.1 | |||
AF501882.1 | AAM15918.1 | |||
AK122949.1 | ||||
AK312614.1 | ||||
BC004186.2 | AAH04186.1 | |||
BC005888.2 | AAH05888.1 | |||
BC008991.1 | AAH08991.1 | |||
BC114618.1 | AAI14619.1 | |||
BT007305.1 | AAP35969.1 | |||
CR456784.1 | CAG33065.1 | |||
M36430.1 | AAA63265.1 | |||
X04526.1 | CAA28207.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv5n111 | Chr.1:1575421 - 1823403 on Build GRCh38 | Deletion | MIB2 GNB1 MMP23A FNDC10 CDK11B NADK SLC35E2B CDK11A MMP23B SLC35E2 |
nsv834091 | Chr.1:1701359 - 1880638 on Build GRCh38 | Loss | GNB1 MMP23A NADK CDK11A SLC35E2 |
nsv1160797 | Chr.1:1566216 - 1805918 on Build GRCh38 | Duplication | MIB2 GNB1 MMP23A FNDC10 SSU72 CDK11B NADK SLC35E2B CDK11A MMP23B SLC35E2 |
nsv482937 | Chr.1:10001 - 2368561 on Build GRCh38 | Loss | CALML6 PERM1 FAM132A TMEM240 LOC105378947 OR4F29 TAS1R3 DVL1 AGRN MMP23A MIR1302-2 CCNL2 CFAP74 PUSL1 LOC105378948 LOC107984841 MXRA8 LOC100134822 TTLL10 B3GALT6 MTND2P28 AURKAIP1 LOC100287934 UBE2J2 LOC102725121 CPTP LOC729737 MIB2 OR4F16 LOC100132287 MIR200A LOC105378592 TMEM88B SCNN1D LOC100288175 ATAD3A TNFRSF4 NOC2L TNFRSF18 PRKCZ GNB1 FAM138A MIR6859-1 MIR429 MIR6808 MIR6727 MTND1P23 PLEKHN1 LOC100506504 LOC105378589 ACAP3 MIR6723 TMEM52 DDX11L1 OR4F5 MIR6859-2 SSU72 RNF223 WASH7P GABRD LINC01128 SLC35E2B ATAD3C SDF4 MMP23B SKI MORN1 LOC148413 LOC100129534 CDK11B NADK VWA1 LOC105378949 SAMD11 LOC100130417 FNDC10 MIR200B FAM87B MRPL20 FAAP20 LOC100288069 LINC00115 LOC284600 CPSF3L HES4 ISG15 LOC107985729 LOC105378591 SLC35E2 LOC102724312 ANKRD65 TTLL10-AS1 LINC01342 LOC101928626 MIR6726 LOC107985728 CDK11A FAM41C ATAD3B C1orf159 KLHL17 LOC100133331 |
nsv1160926 | Chr.1:1772699 - 1905488 on Build GRCh38 | Duplication | GNB1 LOC105378949 NADK |
dgv10n100 | Chr.1:1779975 - 1884542 on Build GRCh38 | Gain | GNB1 NADK |
esv2758913 | Chr.1:1389149 - 2092899 on Build GRCh38 | Gain+Loss | CALML6 TMEM52 LOC107985729 SSU72 LOC105378591 GABRD TMEM240 ATAD3A SLC35E2B ATAD3C MMP23B SLC35E2 PRKCZ GNB1 LOC102724312 MMP23A LOC148413 CCNL2 ANKRD65 CFAP74 CDK11B NADK VWA1 LOC105378949 CDK11A ATAD3B MIB2 FNDC10 MRPL20 LOC105378589 TMEM88B |
More Information
Additional Information:
For this assay, SNP(s) [rs75289190] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |