Assay Details
Target Gene Details
Entrez Gene ID: | 6919 |
Gene Name: | transcription elongation factor A2 |
Gene Aliases: |
TFIIS |
Location: |
Chr.20:64042350-64072347 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TCEA2 | XM_011529022.1 | XP_011527324.1 | ||
XM_011529027.2 | XP_011527329.1 | |||
XM_017028036.1 | XP_016883525.1 | |||
XM_017028037.1 | XP_016883526.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv470564 | Chr.20:64027492 - 64169828 on Build GRCh38 | Gain | LKAAEAR1 LINC00176 RGS19 TCEA2 MIR6813 PRPF6 SOX18 NPBWR2 OPRL1 MYT1 |
nsv586703 | Chr.20:63964886 - 64095388 on Build GRCh38 | Loss | SAMD10 LKAAEAR1 LINC00176 RGS19 ZNF512B TCEA2 MIR6813 PRPF6 SOX18 OPRL1 |
nsv509785 | Chr.20:63999103 - 64137376 on Build GRCh38 | Insertion | LKAAEAR1 LINC00176 RGS19 TCEA2 MIR6813 PRPF6 SOX18 NPBWR2 OPRL1 |
nsv428381 | Chr.20:63583375 - 64334167 on Build GRCh38 | Gain+Loss | STMN3 ARFRP1 ZBTB46-AS1 ABHD16B SLC2A4RG ZBTB46 LINC00266-1 MIR941-5 TCEA2 MIR647 MIR6813 OPRL1 GMEB2 PRPF6 SOX18 LOC100505771 C20orf181 SAMD10 PCMTD2 LKAAEAR1 RTEL1-TNFRSF6B MIR1914 LIME1 RTEL1 MIR941-3 LINC00176 ZNF512B ZGPAT MIR941-1 NPBWR2 UCKL1 RGS19 UCKL1-AS1 DNAJC5 MIR941-4 TPD52L2 MYT1 MIR941-2 TNFRSF6B |
nsv953310 | Chr.20:64017648 - 64160147 on Build GRCh38 | Deletion | LKAAEAR1 LINC00176 RGS19 TCEA2 MIR6813 PRPF6 SOX18 NPBWR2 OPRL1 |
nsv1160691 | Chr.20:63943650 - 64055199 on Build GRCh38 | Deletion | SAMD10 UCKL1 LINC00176 UCKL1-AS1 ZNF512B TCEA2 PRPF6 SOX18 |
esv2758807 | Chr.20:64006869 - 64334167 on Build GRCh38 | Gain+Loss | PCMTD2 LKAAEAR1 LINC00266-1 LINC00176 RGS19 TCEA2 MIR6813 PRPF6 SOX18 NPBWR2 OPRL1 MYT1 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |