Assay Details
Target Gene Details
Entrez Gene ID: | 81857 |
Gene Name: | mediator complex subunit 25 |
Gene Aliases: |
ACID1, ARC92, BVSYS, CMT2B2, P78, PTOV2, TCBAP0758 |
Location: |
Chr.19:49818279-49840384 on Build GRCh38 |
Assay Gene Location: | Within Exon 19 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
MED25 | XM_011527353.1 | 18 | 3065 | XP_011525655.1 |
Target Gene Details
Entrez Gene ID: | 100506033 |
Gene Name: | PTOV1 antisense RNA 1 |
Gene Aliases: |
- |
Location: |
Chr.19:49838645-49851676 on Build GRCh38 |
Assay Gene Location: | Within Exon 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PTOV1-AS1 | NR_040037.1 | 4 | 1351 | |
AK092213.1 | 3 | 2965 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv9739 | Chr.19:47901840 - 50143063 on Build GRCh38 | Gain+Loss | ZNF114 SNAR-C3 CCDC114 PTOV1 SNAR-B1 ELSPBP1 RRAS CABP5 PNKP MED25 SNAR-G2 TRPM4 RUVBL2 PPFIA3 SNAR-A7 BAX NUCB1-AS1 NUP62 HRC CGB5 NUCB1 SCAF1 SNAR-A10 HSD17B14 PTOV1-AS2 EMP3 TMEM143 LOC101928295 PIH1D1 BSPH1 KCNA7 PPP1R15A BCAT2 MIR6799 NTN5 SNAR-A5 SNAR-A2 IZUMO1 MIR4751 GYS1 SNAR-A9 LHB TBC1D17 SULT2B1 MIR4324 KDELR1 SNAR-A8 FUZ CGB2 ZNF473 FLJ26850 CGB1 TULP2 GRIN2D MIR6798 CGB3 SLC6A16 RPL13A AP2A1 CARD8-AS1 SYNGR4 FUT2 CYTH2 ALDH16A1 SNAR-A6 CGB7 SLC17A7 SNAR-C5 C19orf68 VRK3 PLA2G4C SPACA4 CA11 NOSIP SNORD35B CGB8 SNAR-A4 SNORD33 LMTK3 SNORD32A SNAR-A3 LOC105372430 LIG1 KCNJ14 NTF4 SEC1P FTL SNAR-A11 SIGLEC16 GRWD1 LOC100287477 RPL18 MIR4750 SNAR-C4 FAM83E SNAR-A14 CARD8 SIGLEC11 MIR5088 PRR12 SNORD35A LOC105447645 RASIP1 PLEKHA4 TEAD2 SNAR-A13 ADM5 MIR4749 FLT3LG DBP PRRG2 PTH2 C19orf73 AKT1S1 IL4I1 PLA2G4C-AS1 SNRNP70 SNORD34 FGF21 RPS11 DKKL1 SNAR-A1 RCN3 PTOV1-AS1 CPT1C TSKS SNAR-A12 CCDC155 CD37 ATF5 LIN7B PRMT1 FCGRT SNAR-B2 LOC101059948 GFY BCL2L12 SNAR-C1 SNAR-D SPHK2 MAMSTR SNAR-G1 MIR6800 IRF3 DHDH FUT1 SNAR-C2 MIR150 |
nsv470150 | Chr.19:49618821 - 49856789 on Build GRCh38 | Gain | SCAF1 PTOV1-AS2 PTOV1 RRAS MIR5088 MIR6800 PRR12 PTOV1-AS1 MED25 FUZ CPT1C IRF3 TSKS ADM5 MIR4749 PRMT1 AP2A1 BCL2L12 MIR6799 |
dgv53n68 | Chr.19:49724393 - 49943224 on Build GRCh38 | Loss | MIR4751 TBC1D17 PTOV1-AS2 PTOV1 PNKP MIR6800 PTOV1-AS1 MED25 FUZ TSKS MIR4749 ATF5 NUP62 MIR4750 AP2A1 MIR6799 AKT1S1 IL4I1 |
nsv953600 | Chr.19:49555044 - 49938043 on Build GRCh38 | Deletion | MIR4751 TBC1D17 PTOV1 RRAS PNKP PTOV1-AS1 MED25 FUZ CPT1C TSKS ATF5 PRMT1 NUP62 MIR4750 AP2A1 BCL2L12 SCAF1 PTOV1-AS2 MIR5088 MIR6800 PRR12 NOSIP IRF3 ADM5 MIR4749 PRRG2 MIR6799 AKT1S1 IL4I1 |
nsv1160655 | Chr.19:49489110 - 49841830 on Build GRCh38 | Deletion | SNORD34 RPS11 RRAS RCN3 PTOV1-AS1 MED25 FUZ CPT1C TSKS PRMT1 FCGRT RPL13A AP2A1 BCL2L12 SCAF1 MIR5088 MIR6800 PRR12 SNORD35A NOSIP IRF3 ADM5 SNORD35B PRRG2 MIR150 SNORD33 SNORD32A MIR6799 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |