Assay Details
Target Gene Details
Entrez Gene ID: | 25759 |
Gene Name: | SHC adaptor protein 2 |
Gene Aliases: |
SCK, SHCB, SLI |
Location: |
Chr.19:416583-461011 on Build GRCh38 |
Assay Gene Location: | Within Intron 9 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SHC2 | NM_012435.2 | NP_036567.2 | ||
XM_011527893.2 | XP_011526195.1 | |||
XM_011527894.2 | XP_011526196.1 | |||
XM_011527895.2 | XP_011526197.1 | |||
XM_011527896.2 | XP_011526198.1 | |||
XM_017026567.1 | XP_016882056.1 | |||
AB001451.1 | BAA25798.1 | |||
AL360254.1 | CAB96175.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv6155n54 | Chr.19:404077 - 519032 on Build GRCh38 | Loss | ODF3L2 MADCAM1 TPGS1 SHC2 C2CD4C |
nsv428360 | Chr.19:232069 - 702131 on Build GRCh38 | Gain | ODF3L2 LOC101929060 HCN2 PLPP2 RNF126 SHC2 PRSS57 FGF22 CDC34 FSTL3 BSG MADCAM1 POLRMT MIER2 GZMM TPGS1 THEG C2CD4C |
esv2671474 | Chr.19:393636 - 481273 on Build GRCh38 | Deletion | ODF3L2 SHC2 C2CD4C |
dgv1966e59 | Chr.19:431152 - 434850 on Build GRCh38 | Duplication | SHC2 |
nsv577978 | Chr.19:294526 - 782854 on Build GRCh38 | Gain | ODF3L2 LOC101929060 HCN2 RNF126 SHC2 PRSS57 FGF22 PALM CDC34 FSTL3 BSG MISP MADCAM1 POLRMT MIER2 GZMM TPGS1 LOC101928450 THEG C2CD4C |
nsv953938 | Chr.19:355801 - 1104501 on Build GRCh38 | Deletion | MED16 ODF3L2 PTBP1 RNU6-2 RNF126 SHC2 ARHGAP45 R3HDM4 PRSS57 FGF22 PALM ABCA7 PRTN3 PLPPR3 MIR4745 MADCAM1 GZMM TPGS1 AZU1 WDR18 GPX4 ARID3A GRIN3B POLR2E HCN2 CDC34 KISS1R FSTL3 BSG MISP POLRMT LOC101928450 THEG CFD ELANE LOC105372235 RNU6-9 TMEM259 CNN2 MIR3187 C2CD4C |
nsv433453 | Chr.19:431359 - 452577 on Build GRCh38 | Gain | SHC2 |
nsv470101 | Chr.19:401714 - 1008505 on Build GRCh38 | Loss | MED16 ODF3L2 PTBP1 RNF126 SHC2 R3HDM4 PRSS57 FGF22 PALM PRTN3 PLPPR3 MIR4745 MADCAM1 GZMM TPGS1 AZU1 WDR18 ARID3A GRIN3B HCN2 CDC34 KISS1R FSTL3 BSG MISP POLRMT LOC101928450 CFD ELANE LOC105372235 RNU6-9 MIR3187 C2CD4C |
nsv1145825 | Chr.19:426999 - 434600 on Build GRCh38 | Duplication | SHC2 |
nsv509712 | Chr.19:391096 - 558643 on Build GRCh38 | Insertion | ODF3L2 MADCAM1 GZMM TPGS1 SHC2 CDC34 C2CD4C |
dgv1013e212 | Chr.19:416231 - 521269 on Build GRCh38 | Gain | ODF3L2 MADCAM1 TPGS1 SHC2 |
nsv1065558 | Chr.19:305266 - 441626 on Build GRCh38 | Gain | MIER2 SHC2 THEG C2CD4C |
esv25497 | Chr.19:428811 - 434721 on Build GRCh38 | Gain+Loss | SHC2 |
nsv2384 | Chr.19:430805 - 444497 on Build GRCh38 | Insertion | SHC2 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |