Assay Details
Target Gene Details
Entrez Gene ID: | 201254 |
Gene Name: | stimulated by retinoic acid 13 |
Gene Aliases: |
CENP-X, CENPX, D9, FAAP10, MHF2 |
Location: |
Chr.17:82018703-82022930 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
STRA13 | NM_001271006.1 | NP_001257935.1 | ||
NM_001271007.1 | NP_001257936.1 | |||
NM_144998.3 | NP_659435.2 | |||
XM_005256339.2 | XP_005256396.1 | |||
XM_017024326.1 | XP_016879815.1 | |||
XM_017024327.1 | XP_016879816.1 | |||
XM_017024328.1 | XP_016879817.1 | |||
XM_017024329.1 | XP_016879818.1 | |||
BC009571.1 | AAH09571.1 | |||
BC011610.1 | AAH11610.1 | |||
BI837753.1 | ||||
CB110145.1 | ||||
HY110543.1 | ||||
U95006.1 | AAB53638.1 | |||
U95007.1 | AAB53639.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv952392 | Chr.17:81885825 - 82065724 on Build GRCh38 | Deletion | PCYT2 LRRC45 DCXR MYADML2 GPS1 STRA13 RFNG ANAPC11 DUS1L RAC3 ALYREF PYCR1 SIRT7 MAFG ASPSCR1 NPB NOTUM MAFG-AS1 |
nsv576183 | Chr.17:81991355 - 82086850 on Build GRCh38 | Loss | DUS1L RAC3 LRRC45 DCXR GPS1 STRA13 ASPSCR1 RFNG FASN |
nsv428351 | Chr.17:81152631 - 83064073 on Build GRCh38 | Gain | TEPSIN SLC25A10 SLC16A3 PCYT2 DCXR RFNG MIR4525 FN3KRP CCDC57 RAB40B RAC3 TEX19 AATK MIR3186 CCDC137 ACTG1 FASN MIR4740 B3GNTL1 PDE6G UTS2R GPS1 TBCD ZNF750 FOXK2 ALYREF HGS PYCR1 LOC105376791 MAFG HEXDC NOTUM MRPL12 LOC105371925 FSCN2 MIR6786 LRRC45 CD7 SNORD134 MYADML2 NPLOC4 WDR45B ARHGDIA LINC00482 LOC101929511 DUS1L P4HB SIRT7 LOC105371944 FN3K LOC100130370 MCRIP1 GCGR MIR6787 ASPSCR1 NPB PPP1R27 ARL16 FAAP100 OXLD1 AATK-AS1 LOC105376790 STRA13 TSPAN10 CSNK1D ANAPC11 SECTM1 SLC38A10 C17orf89 NARF LOC101929552 BAHCC1 CEP131 OGFOD3 TMEM105 MAFG-AS1 C17orf62 |
nsv470620 | Chr.17:81516973 - 82064485 on Build GRCh38 | Loss | MRPL12 FSCN2 SLC25A10 MIR6786 PCYT2 LRRC45 DCXR MYADML2 NPLOC4 RFNG ARHGDIA DUS1L RAC3 P4HB SIRT7 MCRIP1 CCDC137 GCGR ASPSCR1 NPB PPP1R27 ARL16 FAAP100 OXLD1 PDE6G GPS1 STRA13 TSPAN10 ANAPC11 ALYREF HGS PYCR1 MAFG NOTUM MAFG-AS1 |
dgv5800n54 | Chr.17:82013189 - 82035336 on Build GRCh38 | Loss | RAC3 LRRC45 STRA13 ASPSCR1 |
esv21913 | Chr.17:81828123 - 83103548 on Build GRCh38 | Gain+Loss | SLC16A3 PCYT2 DCXR RFNG MIR4525 FN3KRP CCDC57 RAB40B RAC3 TEX19 FASN B3GNTL1 UTS2R GPS1 TBCD ZNF750 FOXK2 ALYREF PYCR1 LOC105376791 MAFG HEXDC NOTUM LRRC45 CD7 SNORD134 METRNL MYADML2 WDR45B ARHGDIA LOC101929511 DUS1L P4HB SIRT7 LOC105371944 FN3K MCRIP1 MIR6787 ASPSCR1 NPB PPP1R27 LOC105376790 STRA13 CSNK1D ANAPC11 SECTM1 NARF LOC101929552 OGFOD3 MAFG-AS1 C17orf62 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |