Assay Details
Target Gene Details
Entrez Gene ID: | 201254 |
Gene Name: | stimulated by retinoic acid 13 |
Gene Aliases: |
CENP-X, CENPX, D9, FAAP10, MHF2 |
Location: |
Chr.17:82018703-82022930 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
STRA13 | NM_001271006.1 | NP_001257935.1 | ||
NM_001271007.1 | NP_001257936.1 | |||
NM_144998.3 | NP_659435.2 | |||
XM_005256339.2 | XP_005256396.1 | |||
XM_017024326.1 | XP_016879815.1 | |||
XM_017024327.1 | XP_016879816.1 | |||
XM_017024328.1 | XP_016879817.1 | |||
XM_017024329.1 | XP_016879818.1 | |||
BC009571.1 | AAH09571.1 | |||
BC011610.1 | AAH11610.1 | |||
BI837753.1 | ||||
CB110145.1 | ||||
HY110543.1 | ||||
U95006.1 | AAB53638.1 | |||
U95007.1 | AAB53639.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv952392 | Chr.17:81885825 - 82065724 on Build GRCh38 | Deletion | STRA13 ASPSCR1 MAFG-AS1 MYADML2 MAFG ALYREF DCXR PCYT2 NPB GPS1 PYCR1 DUS1L NOTUM LRRC45 ANAPC11 RFNG SIRT7 RAC3 |
nsv576183 | Chr.17:81991355 - 82086850 on Build GRCh38 | Loss | STRA13 ASPSCR1 GPS1 DUS1L DCXR FASN LRRC45 RFNG RAC3 |
nsv428351 | Chr.17:81152631 - 83064073 on Build GRCh38 | Gain | TEX19 MIR3186 CCDC57 LOC105371944 ARL16 PDE6G LOC100130370 AATK-AS1 HGS HEXDC GCGR SLC38A10 FAAP100 TMEM105 ANAPC11 RFNG ZNF750 UTS2R STRA13 LOC101929552 ASPSCR1 MAFG-AS1 CEP131 MAFG ALYREF PPP1R27 NARF PCYT2 WDR45B LOC101929511 FOXK2 PYCR1 TSPAN10 AATK SLC16A3 SIRT7 SNORD134 FSCN2 RAC3 ARHGDIA RAB40B OGFOD3 MYADML2 MIR4740 MIR6786 TBCD NPLOC4 NPB FN3K LOC105376790 MCRIP1 DUS1L NOTUM LOC105371925 FASN LOC105376791 MIR6787 ACTG1 MIR4525 FN3KRP OXLD1 SECTM1 C17orf62 TEPSIN DCXR CSNK1D CD7 P4HB GPS1 B3GNTL1 LINC00482 BAHCC1 LRRC45 CCDC137 SLC25A10 C17orf89 MRPL12 |
nsv470620 | Chr.17:81516973 - 82064485 on Build GRCh38 | Loss | MYADML2 ARL16 PDE6G MIR6786 HGS NPLOC4 NPB MCRIP1 GCGR DUS1L NOTUM FAAP100 ANAPC11 RFNG OXLD1 STRA13 ASPSCR1 MAFG-AS1 MAFG ALYREF DCXR PPP1R27 PCYT2 P4HB GPS1 PYCR1 TSPAN10 LRRC45 CCDC137 SIRT7 FSCN2 RAC3 SLC25A10 MRPL12 ARHGDIA |
dgv5800n54 | Chr.17:82013189 - 82035336 on Build GRCh38 | Loss | STRA13 ASPSCR1 LRRC45 RAC3 |
esv21913 | Chr.17:81828123 - 83103548 on Build GRCh38 | Gain+Loss | TEX19 CCDC57 LOC105371944 HEXDC ANAPC11 RFNG ZNF750 UTS2R STRA13 LOC101929552 ASPSCR1 MAFG-AS1 MAFG ALYREF PPP1R27 NARF PCYT2 WDR45B LOC101929511 FOXK2 PYCR1 SLC16A3 SIRT7 SNORD134 RAC3 METRNL ARHGDIA RAB40B OGFOD3 MYADML2 TBCD NPB FN3K LOC105376790 MCRIP1 DUS1L NOTUM FASN LOC105376791 MIR6787 MIR4525 FN3KRP SECTM1 C17orf62 DCXR CSNK1D CD7 P4HB GPS1 B3GNTL1 LRRC45 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |