Assay Details
Target Gene Details
Entrez Gene ID: | 9727 |
Gene Name: | RAB11 family interacting protein 3 |
Gene Aliases: |
CART1, Rab11-FIP3 |
Location: |
Chr.16:425621-522485 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
RAB11FIP3 | NM_014700.3 | NP_055515.1 | ||
XM_005255713.3 | XP_005255770.1 | |||
XM_005255717.3 | XP_005255774.1 | |||
XM_005255718.3 | XP_005255775.1 | |||
XM_017023907.1 | XP_016879396.1 | |||
AB014565.1 | ||||
AF395731.1 | AAL12940.1 | |||
BC051360.1 | AAH51360.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2422427 | Chr.16:10001 - 2723164 on Build GRCh38 | Duplication | BAIAP3 PRSS27 SNHG9 MIR6511B1 MIR1225 CASKIN1 NPRL3 ECI1 MEIOB MSLN PRSS29P LMF1-AS1 MIR6859-4 WASIR2 ZNF598 DNASE1L2 LOC105371045 MIR3178 EME2 NME4 RNPS1 LOC652276 FAM234A MSRB1 WDR90 TBC1D24 CCDC154 RHBDL1 LOC100287175 NHLRC4 UNKL LOC101929280 TRAF7 CCNF PGP HBZ HS3ST6 CLCN7 LMF1 TBL3 CCDC78 BRICD5 RGS11 NUBP2 MRPS34 TMEM204 GNG13 MIR4717 ABCA17P LOC729652 TMEM8A TPSB2 MPG HN1L ATP6V0C MIR6767 MLST8 SNRNP25 C16orf91 MIR3177 LOC105371184 SSTR5-AS1 NARFL NME3 HBM LOC105371047 STUB1 CHTF18 HBQ1 LOC106660606 RAB11FIP3 DDX11L10 MIR4516 ARHGDIG TELO2 NTN3 NDUFB10 METRN GNPTG GFER RAB40C TPSAB1 LOC107984876 SYNGR3 FLJ42627 NTHL1 C1QTNF8 TPSD1 MIR6768 TPSG1 C16orf59 ERVK13-1 AXIN1 TSC2 FAM173A SSTR5 CACNA1H SNHG19 SNORA64 HBA2 MIR5587 SOX8 METTL26 TSR3 SNORD60 RNF151 ABCA3 PRR25 MIR3180-5 MAPK8IP3 NPW E4F1 MIR3677 MCRIP2 HAGH SNORA10 RHBDF1 LOC105371046 CRAMP1 MIR940 MIR662 IGFALS FAHD1 RPL23AP5 PIGQ SPSB3 WDR24 SLC9A3R2 AMDHD2 LOC107987233 IFT140 MIR3176 LINC00254 HBA1 PTX4 HAGHL DECR2 CEMP1 RHOT2 NOXO1 RAB26 JMJD8 RPUSD1 PKD1 LOC105371049 LOC100134368 CAPN15 LOC105371038 SNORA78 MRPL28 UBE2I LINC00235 RPS2 POLR3K RPL3L WFIKKN1 KCTD5 PRR35 FBXL16 PDIA2 PDPK1 LUC7L |
esv3637576 | Chr.16:439034 - 480097 on Build GRCh38 | Gain | RAB11FIP3 |
esv3637563 | Chr.16:263248 - 505590 on Build GRCh38 | Gain | TMEM8A NME4 ARHGDIG LOC100134368 FAM234A MRPL28 PDIA2 AXIN1 RGS11 RPL23AP5 DECR2 RAB11FIP3 |
nsv526903 | Chr.16:451362 - 810673 on Build GRCh38 | Loss | MCRIP2 METRN RAB40C MIR662 CCDC78 PIGQ MSLN WDR24 LOC107987233 MIR3176 FAM173A GNG13 HAGHL RHOT2 JMJD8 RPUSD1 MIR5587 CAPN15 LOC105371038 METTL26 LOC105371184 NARFL WDR90 LINC00235 WFIKKN1 RHBDL1 LOC100287175 NHLRC4 PRR25 STUB1 PRR35 CHTF18 FBXL16 LOC101929280 RAB11FIP3 |
nsv570954 | Chr.16:342461 - 530124 on Build GRCh38 | Loss | TMEM8A NME4 LOC100134368 CAPN15 MRPL28 AXIN1 LINC00235 RPL23AP5 DECR2 RAB11FIP3 |
dgv32n68 | Chr.16:245507 - 476226 on Build GRCh38 | Loss | TMEM8A NME4 ARHGDIG LOC100134368 FAM234A MRPL28 PDIA2 AXIN1 RGS11 RPL23AP5 DECR2 RAB11FIP3 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |