Assay Details
Target Gene Details
Entrez Gene ID: | 9717 |
Gene Name: | SEC14 like lipid binding 5 |
Gene Aliases: |
PRELID4B |
Location: |
Chr.16:4958317-5019155 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SEC14L5 | NM_014692.1 | NP_055507.1 | ||
AB007880.2 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3637714 | Chr.16:4958035 - 5079276 on Build GRCh38 | Gain | NAGPA-AS1 SEC14L5 C16orf89 NAGPA ALG1 |
esv3637713 | Chr.16:4957958 - 5307305 on Build GRCh38 | Gain | NAGPA-AS1 SEC14L5 C16orf89 EEF2KMT NAGPA RBFOX1 ALG1 |
esv25186 | Chr.16:4858500 - 5142800 on Build GRCh38 | Gain | NAGPA-AS1 SEC14L5 PPL C16orf89 UBN1 EEF2KMT NAGPA ALG1 |
esv2761893 | Chr.16:4941276 - 4995458 on Build GRCh38 | Loss | SEC14L5 |
esv3892763 | Chr.16:4971982 - 4977763 on Build GRCh38 | Loss | SEC14L5 |
esv2422516 | Chr.16:4775920 - 5160979 on Build GRCh38 | Deletion | NAGPA-AS1 SMIM22 SEC14L5 PPL C16orf89 UBN1 SEPT12 EEF2KMT ROGDI GLYR1 NAGPA ALG1 |
nsv1046986 | Chr.16:4049000 - 5555721 on Build GRCh38 | Gain | GLIS2-AS1 C16orf96 PPL UBN1 CDIP1 LINC01569 ZNF500 DNAJA3 SMIM22 EEF2KMT NUDT16L1 NAGPA MIR6769A HMOX2 MGRN1 NAGPA-AS1 C16orf71 SRL SEPT12 CORO7 LOC105371063 ALG1 UBALD1 CORO7-PAM16 NMRAL1 GLIS2 SEC14L5 C16orf89 VASN TFAP4 ROGDI ANKS3 GLYR1 PAM16 RBFOX1 ADCY9 |
nsv1042612 | Chr.16:4965694 - 5150514 on Build GRCh38 | Loss | NAGPA-AS1 SEC14L5 C16orf89 EEF2KMT NAGPA ALG1 |
nsv457360 | Chr.16:4960912 - 5284683 on Build GRCh38 | Loss | NAGPA-AS1 SEC14L5 C16orf89 EEF2KMT NAGPA RBFOX1 ALG1 |
nsv528586 | Chr.16:4951303 - 5021669 on Build GRCh38 | Gain | SEC14L5 |
esv2760069 | Chr.16:4922849 - 5374828 on Build GRCh38 | Gain+Loss | NAGPA-AS1 SEC14L5 PPL C16orf89 EEF2KMT NAGPA RBFOX1 ALG1 |
esv3892762 | Chr.16:4967386 - 5060625 on Build GRCh38 | Gain | NAGPA-AS1 SEC14L5 C16orf89 NAGPA |
More Information
Additional Information:
For this assay, SNP(s) [rs73527335] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |