Assay Details
Target Gene Details
Entrez Gene ID: | 84231 |
Gene Name: | TNF receptor associated factor 7 |
Gene Aliases: |
RFWD1, RNF119 |
Location: |
Chr.16:2155752-2178129 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TRAF7 | NM_032271.2 | NP_115647.2 | ||
XM_005255627.4 | XP_005255684.1 | |||
XM_011522700.1 | XP_011521002.1 | |||
AK090624.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2422427 | Chr.16:10001 - 2723164 on Build GRCh38 | Duplication | WASIR2 BRICD5 SNHG9 NPW METRN HBA1 PRSS27 MPG METTL26 NME4 RPUSD1 LMF1 RGS11 TMEM204 E4F1 RHBDL1 IGFALS PRSS29P LOC105371045 KCTD5 HBZ PDPK1 WFIKKN1 UNKL PKD1 LOC100134368 NUBP2 MIR3677 LOC105371046 CRAMP1 SSTR5 MIR3177 CCDC78 MRPL28 SNORA10 STUB1 TELO2 TSR3 RNPS1 DDX11L10 MIR4717 ATP6V0C NPRL3 LOC105371184 MIR6859-4 HBA2 LOC105371049 SOX8 LOC101929280 CHTF18 TBC1D24 GNG13 ERVK13-1 FLJ42627 FAHD1 TPSG1 LOC729652 GNPTG RPL3L MLST8 SNHG19 FAM234A AMDHD2 RAB40C SYNGR3 DNASE1L2 FBXL16 C16orf91 NARFL BAIAP3 NOXO1 RPL23AP5 IFT140 MAPK8IP3 CEMP1 HAGH MEIOB RAB11FIP3 ZNF598 SNRNP25 RPS2 PTX4 NHLRC4 TMEM8A CACNA1H RHOT2 MIR3176 HS3ST6 LOC105371047 LOC100287175 RAB26 NDUFB10 MCRIP2 HBQ1 NME3 TPSB2 PRR25 PGP SLC9A3R2 CLCN7 DECR2 NTHL1 MRPS34 SNORA64 TSC2 LINC00235 JMJD8 ARHGDIG MIR662 MSLN MIR6511B1 TRAF7 TBL3 CAPN15 CCDC154 RHBDF1 LINC00254 TPSD1 ABCA3 POLR3K LOC107984876 C16orf59 MIR3180-5 HAGHL UBE2I MIR6768 HBM MIR4516 SPSB3 LOC652276 AXIN1 MSRB1 LOC105371038 NTN3 MIR5587 FAM173A LOC106660606 HN1L MIR940 EME2 GFER PIGQ MIR6767 WDR24 PDIA2 ECI1 CCNF SNORD60 CASKIN1 LUC7L WDR90 SNORA78 ABCA17P LMF1-AS1 MIR1225 TPSAB1 SSTR5-AS1 RNF151 LOC107987233 MIR3178 PRR35 C1QTNF8 |
nsv471072 | Chr.16:1971892 - 2317508 on Build GRCh38 | Loss | BRICD5 PGP SLC9A3R2 MLST8 NTHL1 SNHG19 NPW TSC2 SYNGR3 DNASE1L2 MIR6511B1 TRAF7 E4F1 NOXO1 TBL3 LOC106660606 MIR940 GFER PKD1 MIR3677 ZNF598 ECI1 ABCA3 SNORD60 CASKIN1 RAB26 RNPS1 MIR4717 MIR1225 MIR3180-5 LOC105371049 MIR4516 |
dgv4861n54 | Chr.16:2083900 - 2246850 on Build GRCh38 | Loss | PKD1 BRICD5 PGP ECI1 MLST8 SNHG19 TSC2 SNORD60 CASKIN1 DNASE1L2 RAB26 MIR6511B1 TRAF7 E4F1 MIR1225 MIR3180-5 LOC105371049 MIR4516 |
dgv4863n54 | Chr.16:2141733 - 2274302 on Build GRCh38 | Loss | MIR3677 BRICD5 PGP ECI1 MLST8 SNHG19 SNORD60 CASKIN1 DNASE1L2 RAB26 RNPS1 TRAF7 E4F1 LOC106660606 MIR940 |
nsv457349 | Chr.16:2055054 - 2200730 on Build GRCh38 | Loss | PKD1 RAB26 MIR6511B1 TRAF7 MIR1225 MIR3180-5 SNHG19 TSC2 LOC105371049 SNORD60 CASKIN1 MIR4516 |
nsv457351 | Chr.16:2156590 - 2274302 on Build GRCh38 | Loss | DNASE1L2 MIR3677 BRICD5 RNPS1 PGP TRAF7 ECI1 E4F1 MLST8 LOC106660606 MIR940 CASKIN1 |
nsv1052260 | Chr.16:2074546 - 2629655 on Build GRCh38 | Gain | TBC1D24 BRICD5 LOC652276 PGP LOC729652 MLST8 SNHG19 TSC2 AMDHD2 NTN3 DNASE1L2 MIR6511B1 TRAF7 E4F1 LOC106660606 MIR940 PDPK1 CEMP1 PKD1 MIR6767 MIR3677 ECI1 CCNF ABCA3 SNORD60 CASKIN1 RAB26 RNPS1 ABCA17P MIR4717 ATP6V0C C16orf59 MIR1225 MIR3180-5 LOC105371049 MIR3178 MIR6768 MIR4516 |
nsv952902 | Chr.16:2143400 - 2339999 on Build GRCh38 | Deletion | MIR3677 BRICD5 PGP ECI1 MLST8 ABCA3 SNHG19 SNORD60 CASKIN1 DNASE1L2 RAB26 RNPS1 MIR4717 TRAF7 E4F1 LOC106660606 MIR940 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |