Assay Details
Target Gene Details
Entrez Gene ID: | 23162 |
Gene Name: | mitogen-activated protein kinase 8 interacting protein 3 |
Gene Aliases: |
JIP-3, JIP3, JSAP1, SYD2, syd |
Location: |
Chr.16:1706183-1770317 on Build GRCh38 |
Assay Gene Location: | Within Intron 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
MAPK8IP3 | NM_001040439.1 | NP_001035529.1 | ||
NM_001318852.1 | NP_001305781.1 | |||
NM_015133.4 | NP_055948.2 | |||
XM_005255190.2 | XP_005255247.1 | |||
XM_006720869.2 | XP_006720932.1 | |||
XM_011522429.2 | XP_011520731.1 | |||
XM_011522430.2 | XP_011520732.1 | |||
XM_011522431.2 | XP_011520733.1 | |||
XM_011522432.2 | XP_011520734.1 | |||
XM_017023079.1 | XP_016878568.1 | |||
XM_017023080.1 | XP_016878569.1 | |||
XM_017023081.1 | XP_016878570.1 | |||
AB028989.2 | ||||
AB621811.1 | ||||
AK024437.1 | BAB15727.1 | |||
BC137123.1 | ||||
BC137124.1 | ||||
BC144486.1 | ||||
BC150266.1 | ||||
BY795428.2 | ||||
CN405915.1 | ||||
CR749696.1 | CAH18476.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv571169 | Chr.16:1729694 - 1789022 on Build GRCh38 | Loss | NME3 NUBP2 EME2 MAPK8IP3 MIR3177 SPSB3 MRPS34 |
dgv4856n54 | Chr.16:1600945 - 1813519 on Build GRCh38 | Loss | IFT140 NME3 IGFALS CRAMP1 EME2 LOC105371046 MAPK8IP3 HAGH SPSB3 HN1L NUBP2 MIR3177 MRPS34 |
esv2422427 | Chr.16:10001 - 2723164 on Build GRCh38 | Duplication | PDIA2 PDPK1 MPG RNPS1 TBL3 ARHGDIG PRSS29P ERVK13-1 MCRIP2 HBM LOC105371046 BRICD5 RHOT2 CASKIN1 SNORA64 MIR3180-5 MLST8 TMEM8A RAB40C RAB11FIP3 MIR6768 SLC9A3R2 TRAF7 DDX11L10 RPL23AP5 DNASE1L2 NARFL MIR4717 RPS2 FAHD1 E4F1 SNORA10 SPSB3 C16orf59 UNKL PIGQ LOC105371045 ATP6V0C GNG13 MIR3178 NOXO1 CEMP1 LINC00235 MEIOB LOC652276 MIR6859-4 MIR4516 CHTF18 CRAMP1 NTN3 NHLRC4 NPW FAM173A RHBDL1 CCDC154 MAPK8IP3 HAGH ECI1 METTL26 NTHL1 SNHG9 SOX8 PGP RNF151 HBA2 CCNF CACNA1H AMDHD2 LOC105371038 C16orf91 BAIAP3 LMF1 FAM234A RHBDF1 MIR3176 HBZ DECR2 MIR3677 SNRNP25 ZNF598 MIR6767 POLR3K WDR24 MIR5587 AXIN1 PRR35 UBE2I LOC100134368 MIR1225 ABCA17P LOC100287175 WDR90 TPSD1 LOC729652 IGFALS MIR662 FBXL16 SNHG19 RAB26 WFIKKN1 RPUSD1 TELO2 RPL3L CLCN7 LMF1-AS1 MIR6511B1 NDUFB10 LOC105371049 NME4 GNPTG TPSAB1 NME3 LOC107984876 LOC105371047 PKD1 STUB1 FLJ42627 TPSG1 LOC106660606 HBA1 C1QTNF8 SSTR5 LOC107987233 PRSS27 MRPS34 IFT140 SNORD60 TPSB2 LOC101929280 RGS11 MSRB1 SNORA78 CCDC78 EME2 MSLN ABCA3 HN1L JMJD8 HAGHL PTX4 HS3ST6 LOC105371184 NUBP2 NPRL3 MIR940 METRN LUC7L TBC1D24 MRPL28 HBQ1 TSR3 LINC00254 TMEM204 KCTD5 PRR25 WASIR2 TSC2 CAPN15 GFER SSTR5-AS1 SYNGR3 MIR3177 |
nsv1051692 | Chr.16:1505070 - 1866102 on Build GRCh38 | Loss | IFT140 MEIOB NME3 IGFALS CRAMP1 LOC105371047 TMEM204 EME2 LOC105371046 FAHD1 MAPK8IP3 HAGH SPSB3 HN1L TELO2 NUBP2 MIR3177 MRPS34 |
nsv1160328 | Chr.16:1704619 - 1797867 on Build GRCh38 | Deletion | NME3 NUBP2 IGFALS EME2 MAPK8IP3 MIR3177 SPSB3 MRPS34 |
nsv518641 | Chr.16:1645775 - 1835631 on Build GRCh38 | Loss | MEIOB NME3 IGFALS CRAMP1 EME2 FAHD1 MAPK8IP3 HAGH SPSB3 HN1L NUBP2 MIR3177 MRPS34 |
nsv952900 | Chr.16:1724500 - 1827999 on Build GRCh38 | Deletion | NME3 NUBP2 IGFALS EME2 FAHD1 MAPK8IP3 HAGH MIR3177 SPSB3 MRPS34 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |