Hs03941096_cn

• Gene Symbol: CRAMP1
• Assay Reference Genome Location: Chr.16:1617670 on build GRCh38
• Cytoband: 16p13.3

Target Gene Details

• Entrez Gene ID: 57585
• Gene Name: cramped chromatin regulator homolog 1
• Gene Aliases: CRAMP1L, HN1L, TCE4
• Location: Chr.16:1614640-1677908 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CRAMP1	NM_020825.3			NP_065876.3
	BE048705.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv4856n54	Chr.16:1600945 - 1813519 on Build GRCh38	Loss	NUBP2 HN1L SPSB3 IFT140 NME3 LOC105371046 IGFALS HAGH MAPK8IP3 EME2 CRAMP1 MIR3177 MRPS34
esv2422427	Chr.16:10001 - 2723164 on Build GRCh38	Duplication	MPG NTN3 METRN MIR6767 FLJ42627 NME3 CCDC154 CCDC78 LOC106660606 HBM RPL3L PDPK1 MIR6859-4 ZNF598 SNHG9 LUC7L RPS2 WDR24 BRICD5 LOC105371038 MIR662 SPSB3 MIR4717 PRR25 LOC105371049 MIR3677 SNORA78 SLC9A3R2 NOXO1 LINC00235 RHBDF1 ERVK13-1 MSLN IGFALS MIR3178 GFER HBA1 SSTR5-AS1 DECR2 DDX11L10 SNORA64 MIR4516 CEMP1 PRSS29P CLCN7 METTL26 CASKIN1 JMJD8 SOX8 MSRB1 UNKL DNASE1L2 PKD1 MIR3176 MEIOB HBQ1 TMEM204 NHLRC4 NPW NPRL3 ARHGDIG RAB26 HN1L MIR6511B1 RGS11 TBL3 AXIN1 TPSAB1 MRPL28 LOC101929280 AMDHD2 CACNA1H MAPK8IP3 LOC105371045 MIR3177 WASIR2 KCTD5 STUB1 ECI1 PIGQ CCNF RHBDL1 NDUFB10 LOC105371184 PRSS27 MLST8 TSR3 SYNGR3 CHTF18 TPSB2 GNPTG HAGHL CAPN15 PDIA2 HS3ST6 NME4 FAM234A LMF1-AS1 TSC2 NTHL1 HBZ ATP6V0C MRPS34 FBXL16 E4F1 TRAF7 TPSD1 MIR940 IFT140 SNRNP25 RNPS1 MIR3180-5 PGP PTX4 HAGH LINC00254 LOC107987233 CRAMP1 SNHG19 RPL23AP5 GNG13 LOC100287175 C16orf91 TMEM8A SSTR5 RNF151 WFIKKN1 UBE2I BAIAP3 MIR5587 ABCA17P WDR90 TPSG1 LOC105371047 RAB40C PRR35 LOC729652 TELO2 MIR1225 ABCA3 NUBP2 RAB11FIP3 FAHD1 NARFL RPUSD1 FAM173A C1QTNF8 SNORA10 C16orf59 POLR3K LOC105371046 HBA2 TBC1D24 RHOT2 SNORD60 MIR6768 LOC652276 EME2 LMF1 LOC107984876 MCRIP2 LOC100134368
nsv1051692	Chr.16:1505070 - 1866102 on Build GRCh38	Loss	NUBP2 FAHD1 HN1L SPSB3 IFT140 NME3 LOC105371046 IGFALS HAGH LOC105371047 MAPK8IP3 TELO2 EME2 MEIOB CRAMP1 MIR3177 MRPS34 TMEM204
dgv4855n54	Chr.16:1577507 - 1694025 on Build GRCh38	Loss	LOC105371046 HN1L IFT140 CRAMP1
nsv428317	Chr.16:1550716 - 1711581 on Build GRCh38	Gain	LOC105371046 HN1L MAPK8IP3 IFT140 CRAMP1 TMEM204
nsv827496	Chr.16:1589777 - 1638333 on Build GRCh38	Gain	LOC105371046 IFT140 CRAMP1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

DNA metabolism protein

Gene Ontology Categories:

Function(s)

DNA binding
chromatin binding