Assay Details
Target Gene Details
Entrez Gene ID: | 9727 |
Gene Name: | RAB11 family interacting protein 3 |
Gene Aliases: |
CART1, Rab11-FIP3 |
Location: |
Chr.16:425621-522485 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
RAB11FIP3 | NM_014700.3 | NP_055515.1 | ||
XM_005255713.3 | XP_005255770.1 | |||
XM_005255717.3 | XP_005255774.1 | |||
XM_005255718.3 | XP_005255775.1 | |||
XM_017023907.1 | XP_016879396.1 | |||
AB014565.1 | ||||
AF395731.1 | AAL12940.1 | |||
BC051360.1 | AAH51360.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2422427 | Chr.16:10001 - 2723164 on Build GRCh38 | Duplication | DDX11L10 WDR24 FAM234A PTX4 PRSS29P MIR1225 CASKIN1 MCRIP2 METRN NTHL1 HBA1 TRAF7 FAHD1 NPRL3 MIR3180-5 LOC105371038 MIR940 RGS11 NDUFB10 MIR3677 DNASE1L2 CEMP1 ABCA3 PRR35 LMF1 SPSB3 CRAMP1 SNHG19 RPUSD1 AMDHD2 MIR3176 SOX8 MPG NOXO1 LOC729652 LOC652276 GNPTG RHBDL1 PRSS27 IGFALS C16orf91 TSR3 LUC7L NHLRC4 LOC100287175 NME4 TBC1D24 RAB40C LOC105371049 HAGHL MSLN ABCA17P EME2 RAB11FIP3 PIGQ MLST8 SNORA64 FBXL16 C16orf59 RPL23AP5 MIR5587 NUBP2 UBE2I GFER MIR6767 LOC106660606 TELO2 LOC100134368 BAIAP3 LOC105371047 SNRNP25 MIR3177 MEIOB HBQ1 C1QTNF8 LOC101929280 WASIR2 E4F1 CCDC154 MIR6768 SSTR5 PKD1 HN1L SNORD60 PDPK1 CHTF18 CCDC78 HBA2 PGP ECI1 NARFL MSRB1 HAGH MIR4516 RNF151 RAB26 TPSD1 MIR6859-4 SNHG9 FAM173A HS3ST6 LOC107987233 TSC2 HBM MIR6511B1 CCNF ARHGDIG LOC107984876 ERVK13-1 SNORA78 UNKL CACNA1H HBZ SYNGR3 CAPN15 METTL26 SLC9A3R2 CLCN7 TBL3 TPSAB1 SSTR5-AS1 LOC105371184 TMEM204 FLJ42627 PRR25 MAPK8IP3 LOC105371045 MIR3178 IFT140 LINC00235 MIR662 TPSG1 PDIA2 AXIN1 RHBDF1 KCTD5 LMF1-AS1 ATP6V0C RPL3L ZNF598 NPW GNG13 STUB1 RPS2 SNORA10 LINC00254 MIR4717 MRPL28 NME3 BRICD5 MRPS34 RHOT2 POLR3K RNPS1 LOC105371046 TMEM8A JMJD8 WDR90 NTN3 WFIKKN1 DECR2 TPSB2 |
esv3637576 | Chr.16:439034 - 480097 on Build GRCh38 | Gain | RAB11FIP3 |
esv3637563 | Chr.16:263248 - 505590 on Build GRCh38 | Gain | AXIN1 LOC100134368 RGS11 MRPL28 FAM234A DECR2 RPL23AP5 ARHGDIG PDIA2 NME4 TMEM8A RAB11FIP3 |
nsv570954 | Chr.16:342461 - 530124 on Build GRCh38 | Loss | AXIN1 LOC100134368 MRPL28 DECR2 CAPN15 RPL23AP5 LINC00235 NME4 TMEM8A RAB11FIP3 |
dgv4809n54 | Chr.16:322597 - 451362 on Build GRCh38 | Loss | AXIN1 LOC100134368 MRPL28 DECR2 RPL23AP5 NME4 TMEM8A RAB11FIP3 |
dgv32n68 | Chr.16:245507 - 476226 on Build GRCh38 | Loss | AXIN1 LOC100134368 RGS11 MRPL28 FAM234A DECR2 RPL23AP5 ARHGDIG PDIA2 NME4 TMEM8A RAB11FIP3 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |