Assay Details
Target Gene Details
Entrez Gene ID: | 8312 |
Gene Name: | axin 1 |
Gene Aliases: |
AXIN, PPP1R49 |
Location: |
Chr.16:287440-355226 on Build GRCh38 |
Assay Gene Location: | Within Intron 8 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
AXIN1 | NM_003502.3 | NP_003493.1 | ||
NM_181050.2 | NP_851393.1 | |||
NR_134879.1 | ||||
XM_011522682.2 | XP_011520984.1 | |||
XM_011522683.2 | XP_011520985.1 | |||
XM_011522684.2 | XP_011520986.1 | |||
XM_011522686.1 | XP_011520988.1 | |||
XM_017023743.1 | XP_016879232.1 | |||
XM_017023744.1 | XP_016879233.1 | |||
XM_017023745.1 | XP_016879234.1 | |||
XM_017023746.1 | XP_016879235.1 | |||
XM_017023747.1 | XP_016879236.1 | |||
XM_017023748.1 | XP_016879237.1 | |||
AB208876.1 | BAD92113.1 | |||
AF009674.1 | AAC51624.1 | |||
BC044648.1 | AAH44648.1 | |||
KF615847.1 | ||||
KF615848.1 | ||||
KF615849.1 | ||||
KF615850.1 | ||||
KF615851.1 | ||||
KF615852.1 | ||||
KF615853.1 | ||||
KF615854.1 | ||||
KU178413.1 | ||||
KU178414.1 | ||||
KU178415.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3637568 | Chr.16:300040 - 319624 on Build GRCh38 | Gain | AXIN1 |
esv2422427 | Chr.16:10001 - 2723164 on Build GRCh38 | Duplication | RHOT2 TPSD1 NME3 DECR2 C16orf59 PDPK1 LUC7L HAGHL RPL3L RAB26 BAIAP3 CCNF DDX11L10 SSTR5 NPW MIR6767 IFT140 RHBDL1 MIR1225 PKD1 CASKIN1 MIR3177 WFIKKN1 HBA1 MIR6859-4 WDR24 HN1L POLR3K ABCA3 RNF151 TRAF7 SYNGR3 LOC100287175 SPSB3 UNKL LOC100134368 CRAMP1 RAB11FIP3 MIR940 MIR6768 FAM173A LOC106660606 CEMP1 SNORA78 LOC652276 STUB1 SNRNP25 UBE2I JMJD8 MAPK8IP3 SLC9A3R2 METRN METTL26 NUBP2 MLST8 HBM PRSS29P ATP6V0C TSR3 NDUFB10 LOC729652 CAPN15 NTN3 TMEM8A LOC101929280 RAB40C RPS2 MCRIP2 ARHGDIG RNPS1 GFER MIR6511B1 LMF1 MSRB1 PDIA2 MIR4717 MSLN HAGH C1QTNF8 TPSB2 MIR3176 LOC105371047 PTX4 E4F1 LOC107984876 MIR3180-5 PIGQ PRR35 CACNA1H NHLRC4 CCDC78 GNPTG HBQ1 LOC105371184 LMF1-AS1 SSTR5-AS1 MEIOB NPRL3 LOC105371045 MIR3677 HS3ST6 NOXO1 IGFALS LOC107987233 MIR662 LINC00235 EME2 ZNF598 AMDHD2 PRR25 BRICD5 SOX8 CLCN7 FBXL16 KCTD5 CCDC154 ECI1 SNORA10 SNHG19 HBZ MRPS34 HBA2 TPSG1 C16orf91 SNHG9 FAHD1 CHTF18 MIR3178 RPL23AP5 GNG13 NARFL MIR5587 RGS11 WASIR2 LOC105371046 MRPL28 TELO2 NME4 SNORA64 LOC105371049 MIR4516 LINC00254 AXIN1 TMEM204 RPUSD1 PGP TBL3 ABCA17P FAM234A RHBDF1 MPG PRSS27 FLJ42627 TPSAB1 NTHL1 ERVK13-1 WDR90 TBC1D24 SNORD60 TSC2 LOC105371038 DNASE1L2 |
esv3637564 | Chr.16:287941 - 370218 on Build GRCh38 | Gain | MRPL28 AXIN1 |
nsv952896 | Chr.16:273501 - 321500 on Build GRCh38 | Deletion | ARHGDIG RGS11 AXIN1 PDIA2 |
esv3637563 | Chr.16:263248 - 505590 on Build GRCh38 | Gain | RAB11FIP3 DECR2 MRPL28 FAM234A NME4 TMEM8A ARHGDIG RGS11 AXIN1 PDIA2 LOC100134368 RPL23AP5 |
nsv570951 | Chr.16:279671 - 322597 on Build GRCh38 | Loss | ARHGDIG AXIN1 PDIA2 |
dgv32n68 | Chr.16:245507 - 476226 on Build GRCh38 | Loss | RAB11FIP3 DECR2 MRPL28 FAM234A NME4 TMEM8A ARHGDIG RGS11 AXIN1 PDIA2 LOC100134368 RPL23AP5 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |