Assay Details
Target Gene Details
Entrez Gene ID: | 84231 |
Gene Name: | TNF receptor associated factor 7 |
Gene Aliases: |
RFWD1, RNF119 |
Location: |
Chr.16:2155752-2178129 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TRAF7 | NM_032271.2 | NP_115647.2 | ||
XM_005255627.4 | XP_005255684.1 | |||
XM_011522700.1 | XP_011521002.1 | |||
AK090624.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2422427 | Chr.16:10001 - 2723164 on Build GRCh38 | Duplication | PDIA2 TBC1D24 DNASE1L2 HBQ1 MIR6768 FBXL16 WDR24 CAPN15 MIR3178 HAGHL RAB40C ABCA3 RPS2 LOC100134368 NOXO1 LOC729652 TPSAB1 LUC7L SNHG9 MIR5587 BAIAP3 SNORA78 SSTR5-AS1 NDUFB10 LOC106660606 NME3 RPL23AP5 MIR3677 MIR4516 HBZ IFT140 RNF151 PIGQ MIR6767 GNPTG METRN MRPL28 FAM234A HBA1 RPL3L METTL26 PKD1 MPG HN1L PRR35 MSRB1 CRAMP1 TPSG1 NTN3 MIR6859-4 C16orf59 POLR3K UBE2I NME4 ABCA17P HS3ST6 BRICD5 TBL3 RNPS1 PTX4 DECR2 ERVK13-1 PRR25 AMDHD2 RAB11FIP3 MIR1225 MEIOB MCRIP2 TSC2 NPW MIR662 RHBDF1 CHTF18 LOC100287175 ZNF598 ATP6V0C NUBP2 NPRL3 KCTD5 LOC105371049 LOC105371045 AXIN1 PGP PRSS27 TELO2 LOC105371038 CCDC154 SLC9A3R2 SSTR5 LOC101929280 CCDC78 NTHL1 C1QTNF8 C16orf91 GFER MIR6511B1 STUB1 HBM IGFALS ECI1 TMEM204 PRSS29P MSLN MIR3177 SOX8 MIR3176 CASKIN1 JMJD8 E4F1 TSR3 MRPS34 TPSD1 GNG13 CACNA1H RHOT2 ARHGDIG LOC107984876 RPUSD1 LINC00235 FAHD1 UNKL HBA2 LMF1 LOC107987233 RAB26 WDR90 SNORA64 MAPK8IP3 SNHG19 LINC00254 CLCN7 SNORD60 CEMP1 RGS11 MIR3180-5 LOC652276 MIR940 LMF1-AS1 RHBDL1 LOC105371184 SPSB3 SYNGR3 SNORA10 TPSB2 TMEM8A TRAF7 MLST8 DDX11L10 FAM173A HAGH WASIR2 FLJ42627 LOC105371047 SNRNP25 PDPK1 MIR4717 NHLRC4 EME2 LOC105371046 NARFL WFIKKN1 CCNF |
nsv471072 | Chr.16:1971892 - 2317508 on Build GRCh38 | Loss | SNHG19 SLC9A3R2 DNASE1L2 BRICD5 TBL3 RNPS1 SNORD60 NTHL1 MIR3180-5 MIR940 GFER MIR6511B1 ABCA3 NOXO1 SYNGR3 ECI1 MIR1225 TSC2 TRAF7 MLST8 LOC106660606 NPW MIR3677 MIR4516 ZNF598 CASKIN1 E4F1 MIR4717 LOC105371049 PKD1 PGP RAB26 |
dgv4861n54 | Chr.16:2083900 - 2246850 on Build GRCh38 | Loss | TRAF7 MLST8 SNHG19 DNASE1L2 MIR4516 BRICD5 CASKIN1 SNORD60 MIR3180-5 E4F1 MIR6511B1 LOC105371049 PKD1 PGP ECI1 MIR1225 RAB26 TSC2 |
dgv4863n54 | Chr.16:2141733 - 2274302 on Build GRCh38 | Loss | TRAF7 MLST8 LOC106660606 SNHG19 DNASE1L2 MIR3677 BRICD5 CASKIN1 RNPS1 SNORD60 E4F1 MIR940 PGP ECI1 RAB26 |
nsv457349 | Chr.16:2055054 - 2200730 on Build GRCh38 | Loss | TRAF7 SNHG19 MIR4516 LOC105371049 CASKIN1 PKD1 SNORD60 MIR3180-5 MIR1225 MIR6511B1 RAB26 TSC2 |
nsv457351 | Chr.16:2156590 - 2274302 on Build GRCh38 | Loss | TRAF7 MLST8 LOC106660606 DNASE1L2 MIR3677 BRICD5 CASKIN1 RNPS1 PGP ECI1 E4F1 MIR940 |
nsv1052260 | Chr.16:2074546 - 2629655 on Build GRCh38 | Gain | SNHG19 TBC1D24 DNASE1L2 ABCA17P BRICD5 MIR6768 RNPS1 MIR3178 SNORD60 CEMP1 MIR3180-5 LOC652276 MIR940 MIR6511B1 ABCA3 LOC729652 AMDHD2 ECI1 MIR1225 TSC2 TRAF7 MLST8 LOC106660606 MIR3677 MIR4516 CASKIN1 MIR6767 E4F1 ATP6V0C PDPK1 MIR4717 LOC105371049 PKD1 PGP NTN3 CCNF C16orf59 RAB26 |
nsv952902 | Chr.16:2143400 - 2339999 on Build GRCh38 | Deletion | TRAF7 MLST8 LOC106660606 SNHG19 DNASE1L2 MIR3677 BRICD5 CASKIN1 RNPS1 SNORD60 E4F1 MIR940 MIR4717 ABCA3 PGP ECI1 RAB26 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |