Assay Details
Target Gene Details
Entrez Gene ID: | 84231 |
Gene Name: | TNF receptor associated factor 7 |
Gene Aliases: |
RFWD1, RNF119 |
Location: |
Chr.16:2155752-2178129 on Build GRCh38 |
Assay Gene Location: | Within Intron 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TRAF7 | NM_032271.2 | NP_115647.2 | ||
XM_005255627.4 | XP_005255684.1 | |||
XM_011522700.1 | XP_011521002.1 | |||
AK090624.1 | ||||
AL136921.1 | CAB66855.1 | |||
AY569455.1 | AAS68363.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2422427 | Chr.16:10001 - 2723164 on Build GRCh38 | Duplication | MIR6511B1 MEIOB DNASE1L2 MIR4516 RAB26 HBM UBE2I NDUFB10 DECR2 AXIN1 SNORA78 C1QTNF8 IGFALS NME4 TMEM204 TPSD1 LOC105371038 RPS2 STUB1 LOC100134368 RHBDF1 MIR3177 EME2 RGS11 WDR24 GFER ZNF598 METTL26 C16orf59 LMF1-AS1 GNPTG TSC2 PDPK1 CLCN7 MPG MRPL28 MIR662 MAPK8IP3 LMF1 LOC107987233 MIR6859-4 CRAMP1 HBZ DDX11L10 MLST8 NME3 MIR3180-5 METRN SNORA64 PRR25 WASIR2 RAB40C LUC7L SSTR5-AS1 MIR5587 TSR3 MRPS34 RNF151 LOC105371046 CAPN15 MIR4717 PDIA2 PKD1 LOC105371045 NPRL3 SOX8 RPUSD1 POLR3K AMDHD2 CCDC78 ARHGDIG MIR3677 NUBP2 HBA2 HAGHL PRR35 NPW LOC107984876 FAHD1 MIR940 PRSS29P JMJD8 PIGQ FAM173A LOC105371184 LOC100287175 GNG13 CASKIN1 RHOT2 TBC1D24 IFT140 LOC105371047 MCRIP2 RPL3L SNHG9 WFIKKN1 MIR1225 E4F1 LOC729652 PTX4 ATP6V0C LOC106660606 TRAF7 MIR6767 LINC00254 HN1L TELO2 NARFL SLC9A3R2 ERVK13-1 FLJ42627 LOC652276 LOC101929280 CACNA1H SYNGR3 SNRNP25 SPSB3 HS3ST6 FBXL16 ABCA17P ECI1 RNPS1 NHLRC4 CHTF18 C16orf91 CCDC154 RHBDL1 SNORA10 TPSG1 PGP HBQ1 MIR6768 LOC105371049 ABCA3 RAB11FIP3 UNKL MIR3176 MSLN FAM234A RPL23AP5 TPSB2 NTN3 BRICD5 PRSS27 TBL3 TMEM8A HAGH BAIAP3 MSRB1 SNHG19 WDR90 MIR3178 NTHL1 CEMP1 KCTD5 LINC00235 CCNF SNORD60 NOXO1 HBA1 TPSAB1 SSTR5 |
nsv471072 | Chr.16:1971892 - 2317508 on Build GRCh38 | Loss | MIR6511B1 ECI1 RNPS1 DNASE1L2 MIR4516 MLST8 RAB26 MIR3180-5 CASKIN1 PGP LOC105371049 ABCA3 MIR1225 E4F1 LOC106660606 TRAF7 MIR4717 BRICD5 SLC9A3R2 TBL3 PKD1 GFER ZNF598 SNHG19 MIR3677 TSC2 SYNGR3 NPW NTHL1 SNORD60 NOXO1 MIR940 |
dgv4861n54 | Chr.16:2083900 - 2246850 on Build GRCh38 | Loss | MIR6511B1 ECI1 DNASE1L2 BRICD5 PKD1 MIR4516 MLST8 RAB26 SNHG19 MIR3180-5 CASKIN1 TSC2 PGP SNORD60 LOC105371049 MIR1225 E4F1 TRAF7 |
dgv4863n54 | Chr.16:2141733 - 2274302 on Build GRCh38 | Loss | ECI1 RNPS1 DNASE1L2 BRICD5 MLST8 RAB26 SNHG19 CASKIN1 MIR3677 PGP SNORD60 E4F1 MIR940 LOC106660606 TRAF7 |
nsv457349 | Chr.16:2055054 - 2200730 on Build GRCh38 | Loss | MIR6511B1 CASKIN1 TSC2 PKD1 SNORD60 LOC105371049 MIR4516 MIR1225 RAB26 TRAF7 SNHG19 MIR3180-5 |
nsv457351 | Chr.16:2156590 - 2274302 on Build GRCh38 | Loss | CASKIN1 MIR3677 ECI1 RNPS1 DNASE1L2 BRICD5 PGP MLST8 E4F1 MIR940 LOC106660606 TRAF7 |
nsv1052260 | Chr.16:2074546 - 2629655 on Build GRCh38 | Gain | MIR6511B1 ABCA17P ECI1 RNPS1 DNASE1L2 MIR4516 MLST8 RAB26 MIR3180-5 CASKIN1 TBC1D24 PGP MIR6768 LOC105371049 ABCA3 MIR1225 E4F1 LOC729652 ATP6V0C LOC106660606 TRAF7 MIR6767 NTN3 MIR4717 BRICD5 PKD1 C16orf59 SNHG19 LOC652276 AMDHD2 MIR3677 TSC2 MIR3178 PDPK1 CEMP1 CCNF SNORD60 MIR940 |
nsv952902 | Chr.16:2143400 - 2339999 on Build GRCh38 | Deletion | ECI1 RNPS1 DNASE1L2 MIR4717 BRICD5 MLST8 RAB26 SNHG19 CASKIN1 MIR3677 PGP SNORD60 ABCA3 E4F1 MIR940 LOC106660606 TRAF7 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |