Assay Details
Target Gene Details
Entrez Gene ID: | 9727 |
Gene Name: | RAB11 family interacting protein 3 |
Gene Aliases: |
CART1, Rab11-FIP3 |
Location: |
Chr.16:425621-522485 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
RAB11FIP3 | NM_014700.3 | NP_055515.1 | ||
XM_005255713.3 | XP_005255770.1 | |||
XM_005255717.3 | XP_005255774.1 | |||
XM_005255718.3 | XP_005255775.1 | |||
XM_017023907.1 | XP_016879396.1 | |||
AB014565.1 | ||||
AF395731.1 | AAL12940.1 | |||
BC051360.1 | AAH51360.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2422427 | Chr.16:10001 - 2723164 on Build GRCh38 | Duplication | METRN PIGQ PKD1 PRSS27 TMEM204 LOC105371047 RAB11FIP3 CASKIN1 GFER MRPS34 RNF151 MIR4717 RNPS1 HS3ST6 NPW RHBDF1 WDR90 AMDHD2 HN1L RHOT2 LOC107987233 GNG13 WFIKKN1 MSRB1 MIR662 TBL3 HAGHL ZNF598 ATP6V0C POLR3K MIR3180-5 MIR4516 LMF1-AS1 CCDC154 LOC105371038 CHTF18 LOC105371046 MIR3176 TSR3 GNPTG NTHL1 PRSS29P MIR3677 CRAMP1 DDX11L10 PGP LINC00254 PRR35 C16orf59 LMF1 IGFALS MIR940 HBZ WDR24 MIR6768 FAHD1 MLST8 TPSD1 SYNGR3 JMJD8 NUBP2 RPUSD1 MIR1225 RGS11 TELO2 TRAF7 FAM234A MIR6511B1 FLJ42627 LOC100287175 LOC105371045 LOC100134368 EME2 NME3 FBXL16 MSLN C16orf91 BAIAP3 SOX8 RAB26 TPSAB1 SSTR5 CEMP1 CCDC78 SNORD60 E4F1 ARHGDIG SNHG19 NTN3 PRR25 PDPK1 MIR6767 CACNA1H CCNF BRICD5 WASIR2 HBA2 DNASE1L2 CLCN7 NME4 MPG MIR3177 RAB40C ERVK13-1 MRPL28 UBE2I SLC9A3R2 RPL23AP5 TSC2 HBA1 MIR3178 MAPK8IP3 LUC7L LOC107984876 NARFL METTL26 RHBDL1 MEIOB MIR5587 SNORA10 ABCA17P NPRL3 RPS2 LOC106660606 NHLRC4 MCRIP2 TPSB2 HBM AXIN1 STUB1 PTX4 LOC105371049 LOC652276 NDUFB10 TMEM8A SSTR5-AS1 RPL3L HAGH ABCA3 KCTD5 CAPN15 PDIA2 TPSG1 IFT140 C1QTNF8 SNHG9 SPSB3 DECR2 NOXO1 FAM173A ECI1 LOC729652 TBC1D24 HBQ1 MIR6859-4 SNORA78 SNRNP25 LINC00235 SNORA64 UNKL LOC101929280 LOC105371184 |
esv3637576 | Chr.16:439034 - 480097 on Build GRCh38 | Gain | RAB11FIP3 |
esv3637563 | Chr.16:263248 - 505590 on Build GRCh38 | Gain | TMEM8A RPL23AP5 RGS11 NME4 FAM234A PDIA2 AXIN1 LOC100134368 MRPL28 DECR2 RAB11FIP3 ARHGDIG |
nsv570954 | Chr.16:342461 - 530124 on Build GRCh38 | Loss | TMEM8A RPL23AP5 NME4 CAPN15 LINC00235 AXIN1 LOC100134368 MRPL28 DECR2 RAB11FIP3 |
dgv4809n54 | Chr.16:322597 - 451362 on Build GRCh38 | Loss | TMEM8A RPL23AP5 NME4 AXIN1 LOC100134368 MRPL28 DECR2 RAB11FIP3 |
dgv32n68 | Chr.16:245507 - 476226 on Build GRCh38 | Loss | TMEM8A RPL23AP5 RGS11 NME4 FAM234A PDIA2 AXIN1 LOC100134368 MRPL28 DECR2 RAB11FIP3 ARHGDIG |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |