Assay Details
Target Gene Details
Entrez Gene ID: | 8312 |
Gene Name: | axin 1 |
Gene Aliases: |
AXIN, PPP1R49 |
Location: |
Chr.16:287440-355226 on Build GRCh38 |
Assay Gene Location: | Within Intron 13 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
AXIN1 | NM_003502.3 | NP_003493.1 | ||
NM_181050.2 | NP_851393.1 | |||
NR_134879.1 | ||||
XM_011522682.2 | XP_011520984.1 | |||
XM_011522683.2 | XP_011520985.1 | |||
XM_011522684.2 | XP_011520986.1 | |||
XM_011522686.1 | XP_011520988.1 | |||
XM_017023743.1 | XP_016879232.1 | |||
XM_017023744.1 | XP_016879233.1 | |||
XM_017023745.1 | XP_016879234.1 | |||
XM_017023746.1 | XP_016879235.1 | |||
AB208876.1 | BAD92113.1 | |||
AF009674.1 | AAC51624.1 | |||
BC017447.1 | AAH17447.1 | |||
BC044648.1 | AAH44648.1 | |||
KF615847.1 | ||||
KF615848.1 | ||||
KF615849.1 | ||||
KF615850.1 | ||||
KF615851.1 | ||||
KF615852.1 | ||||
KF615853.1 | ||||
KF615854.1 | ||||
KU178413.1 | ||||
KU178414.1 | ||||
KU178415.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2422427 | Chr.16:10001 - 2723164 on Build GRCh38 | Duplication | JMJD8 CAPN15 C16orf91 MRPL28 DECR2 TPSAB1 MIR6768 PKD1 TPSD1 ATP6V0C MIR4516 LOC101929280 MIR3177 TELO2 DNASE1L2 MIR5587 RPS2 CEMP1 FLJ42627 TSR3 MIR662 PRR25 NHLRC4 MAPK8IP3 RNPS1 PRSS29P ARHGDIG SNHG9 SNORD60 HBQ1 CRAMP1 LOC105371045 PDIA2 LMF1-AS1 MSRB1 MSLN NPW MIR6859-4 NUBP2 RHBDF1 HBM GNPTG HBZ STUB1 NTN3 CASKIN1 HAGHL NTHL1 NARFL MIR3178 HBA2 WDR90 ERVK13-1 PRR35 TBC1D24 RPUSD1 MCRIP2 FAHD1 LOC100134368 PDPK1 TMEM8A TMEM204 ZNF598 DDX11L10 MIR3677 RPL23AP5 FBXL16 C16orf59 CHTF18 ECI1 NME3 PTX4 POLR3K RPL3L TSC2 NOXO1 RAB26 RHBDL1 SSTR5 NDUFB10 IGFALS C1QTNF8 MRPS34 MIR3180-5 WFIKKN1 SPSB3 LOC107987233 BRICD5 LOC100287175 SNORA78 MEIOB IFT140 MPG HAGH CCDC78 BAIAP3 ABCA3 UNKL WDR24 SOX8 LOC105371038 MIR6511B1 MIR4717 TRAF7 LUC7L SNORA64 HN1L E4F1 SNHG19 UBE2I RHOT2 SLC9A3R2 CCNF ABCA17P FAM234A LOC106660606 RNF151 TPSB2 TBL3 MIR6767 SYNGR3 PIGQ LOC105371047 RAB11FIP3 MIR1225 MIR940 LOC105371046 SSTR5-AS1 LMF1 GFER RAB40C AMDHD2 PGP LINC00254 CCDC154 KCTD5 METRN CACNA1H HBA1 MIR3176 MLST8 LOC729652 AXIN1 LOC107984876 PRSS27 LOC105371184 CLCN7 EME2 SNORA10 FAM173A LOC652276 LINC00235 METTL26 NME4 LOC105371049 NPRL3 SNRNP25 GNG13 WASIR2 RGS11 HS3ST6 TPSG1 |
esv3637564 | Chr.16:287941 - 370218 on Build GRCh38 | Gain | AXIN1 MRPL28 |
nsv952896 | Chr.16:273501 - 321500 on Build GRCh38 | Deletion | PDIA2 AXIN1 RGS11 ARHGDIG |
esv3637563 | Chr.16:263248 - 505590 on Build GRCh38 | Gain | TMEM8A PDIA2 AXIN1 RPL23AP5 RAB11FIP3 RGS11 MRPL28 NME4 FAM234A LOC100134368 DECR2 ARHGDIG |
nsv570951 | Chr.16:279671 - 322597 on Build GRCh38 | Loss | PDIA2 AXIN1 ARHGDIG |
nsv827477 | Chr.16:262247 - 297639 on Build GRCh38 | Gain | PDIA2 AXIN1 RGS11 FAM234A ARHGDIG |
nsv570947 | Chr.16:272935 - 297326 on Build GRCh38 | Loss | PDIA2 AXIN1 RGS11 ARHGDIG |
dgv32n68 | Chr.16:245507 - 476226 on Build GRCh38 | Loss | TMEM8A PDIA2 AXIN1 RPL23AP5 RAB11FIP3 RGS11 MRPL28 NME4 FAM234A LOC100134368 DECR2 ARHGDIG |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |